RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
SYT1-212ENST00000552744 L1TD1Q5T7N2 865 aaKnown RBP9.93□□□□□ -0.82
SYT1-212ENST00000552744 TBC1D32Q96NH3 1257 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 PREX2Q70Z35 1606 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 FTSJ3Q8IY81 847 aaKnown RBP9.93□□□□□ -0.82
SYT1-212ENST00000552744 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 TRAK1Q9UPV9 953 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 UNC13BO14795 1591 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
SYT1-212ENST00000552744 GOLGA6L3A6NEY3 463 aa9.92□□□□□ -0.82
SYT1-212ENST00000552744 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
SYT1-212ENST00000552744 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
SYT1-212ENST00000552744 IQGAP3Q86VI3 1631 aa9.92□□□□□ -0.82
SYT1-212ENST00000552744 XRCC6P12956 609 aaKnown RBP eCLIP9.92□□□□□ -0.82
SYT1-212ENST00000552744 EFCAB2Q5VUJ9 269 aa9.92□□□□□ -0.82
SYT1-212ENST00000552744 NAP1L5Q96NT1 182 aaPredicted RBP9.92□□□□□ -0.82
SYT1-212ENST00000552744 KIF3BO15066 747 aa9.91□□□□□ -0.82
SYT1-212ENST00000552744 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYT1-212ENST00000552744 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
SYT1-212ENST00000552744 UBE2Q2Q8WVN8 375 aa9.91□□□□□ -0.82
SYT1-212ENST00000552744 SPAG9O60271 1321 aaKnown RBP9.91□□□□□ -0.82
SYT1-212ENST00000552744 MTHFSP49914 203 aa9.91□□□□□ -0.82
SYT1-212ENST00000552744 TSR2Q969E8 191 aaKnown RBP9.91□□□□□ -0.82
SYT1-212ENST00000552744 RUNDC1Q96C34 613 aa9.91□□□□□ -0.82
SYT1-212ENST00000552744 SYNMO15061 1565 aa9.91□□□□□ -0.82
SYT1-212ENST00000552744 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
SYT1-212ENST00000552744 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYT1-212ENST00000552744 MAST1Q9Y2H9 1570 aa9.9□□□□□ -0.82
SYT1-212ENST00000552744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYT1-212ENST00000552744 DUOX2Q9NRD8 1548 aa9.9□□□□□ -0.82
SYT1-212ENST00000552744 MCM4P33991 863 aa9.9□□□□□ -0.82
SYT1-212ENST00000552744 C22orf23Q9BZE7 217 aa9.9□□□□□ -0.82
SYT1-212ENST00000552744 MADDQ8WXG6 1647 aa9.9□□□□□ -0.83
SYT1-212ENST00000552744 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
SYT1-212ENST00000552744 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
SYT1-212ENST00000552744 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
SYT1-212ENST00000552744 TRAK2O60296 914 aa9.89□□□□□ -0.83
SYT1-212ENST00000552744 TMEM132EQ6IEE7 984 aa9.89□□□□□ -0.83
SYT1-212ENST00000552744 ITPRIPQ8IWB1 547 aa9.89□□□□□ -0.83
SYT1-212ENST00000552744 ATP10AO60312 1499 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 NPC1L1Q9UHC9 1359 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 IQGAP1P46940 1657 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 TSPOAP1O95153 1857 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
SYT1-212ENST00000552744 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
SYT1-212ENST00000552744 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
SYT1-212ENST00000552744 DZIP1LQ8IYY4 767 aaKnown RBP9.88□□□□□ -0.83
SYT1-212ENST00000552744 NGEFQ8N5V2 710 aa9.88□□□□□ -0.83
SYT1-212ENST00000552744 MVPQ14764 893 aaKnown RBP9.87□□□□□ -0.83
SYT1-212ENST00000552744 ZKSCAN2Q63HK3 967 aa9.87□□□□□ -0.83
SYT1-212ENST00000552744 PNNQ9H307 717 aaKnown RBP9.87□□□□□ -0.83
SYT1-212ENST00000552744 NINLQ9Y2I6 1382 aa9.87□□□□□ -0.83
SYT1-212ENST00000552744 MYOM1P52179 1685 aa9.87□□□□□ -0.83
SYT1-212ENST00000552744 VIRMAQ69YN4 1812 aaKnown RBP9.87□□□□□ -0.83
SYT1-212ENST00000552744 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
SYT1-212ENST00000552744 CFAP53Q96M91 514 aa9.87□□□□□ -0.83
SYT1-212ENST00000552744 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
SYT1-212ENST00000552744 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
SYT1-212ENST00000552744 CFAP74Q9C0B2 1584 aa9.86□□□□□ -0.83
SYT1-212ENST00000552744 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
SYT1-212ENST00000552744 POLR3AO14802 1390 aaPredicted RBP9.86□□□□□ -0.83
SYT1-212ENST00000552744 DCAF8L1A6NGE4 600 aa9.86□□□□□ -0.83
SYT1-212ENST00000552744 EXOSC9Q06265 439 aaKnown RBP9.86□□□□□ -0.83
SYT1-212ENST00000552744 MYH16Q9H6N6 1097 aa9.86□□□□□ -0.83
SYT1-212ENST00000552744 UGGT1Q9NYU2 1555 aa9.85□□□□□ -0.83
SYT1-212ENST00000552744 ASXL2Q76L83 1435 aa9.85□□□□□ -0.83
SYT1-212ENST00000552744 SCAPERQ9BY12 1400 aa9.85□□□□□ -0.83
SYT1-212ENST00000552744 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
SYT1-212ENST00000552744 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
SYT1-212ENST00000552744 HSP90AA1P07900 732 aaKnown RBP9.84□□□□□ -0.83
SYT1-212ENST00000552744 LNPKQ9C0E8 428 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 CLTCL1P53675 1640 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 KANK1Q14678 1352 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 TRIM27P14373 513 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
SYT1-212ENST00000552744 ABCA9Q8IUA7 1624 aa9.84□□□□□ -0.83
SYT1-212ENST00000552744 SSH1Q8WYL5 1049 aa9.83□□□□□ -0.84
SYT1-212ENST00000552744 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
SYT1-212ENST00000552744 FSD2A1L4K1 749 aa9.83□□□□□ -0.84
SYT1-212ENST00000552744 CEP152O94986 1710 aa9.83□□□□□ -0.84
SYT1-212ENST00000552744 SPHKAPQ2M3C7 1700 aa9.83□□□□□ -0.84
SYT1-212ENST00000552744 PLCH2O75038 1416 aa9.82□□□□□ -0.84
SYT1-212ENST00000552744 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
SYT1-212ENST00000552744 TMEM57Q8N5G2 664 aa9.82□□□□□ -0.84
SYT1-212ENST00000552744 GRPEL1Q9HAV7 217 aa9.82□□□□□ -0.84
SYT1-212ENST00000552744 TRPM2O94759 1503 aa9.82□□□□□ -0.84
SYT1-212ENST00000552744 AAMPQ13685 434 aa9.82□□□□□ -0.84
SYT1-212ENST00000552744 MRE11P49959 708 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 TRIM44Q96DX7 344 aaPredicted RBP9.81□□□□□ -0.84
SYT1-212ENST00000552744 CABP2Q9NPB3 220 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 CFAP65Q6ZU64 1925 aaKnown RBP9.81□□□□□ -0.84
SYT1-212ENST00000552744 ARAP3Q8WWN8 1544 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 ATF7IPQ6VMQ6 1270 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 GGNBP2Q9H3C7 697 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 DDX19BQ9UMR2 479 aa9.81□□□□□ -0.84
SYT1-212ENST00000552744 PTPRTO14522 1441 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms