RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
CUX2-203ENST00000551604 RSBN1LQ6PCB5 846 aaPredicted RBP9.22□□□□□ -0.93
CUX2-203ENST00000551604 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.94
CUX2-203ENST00000551604 PPP4CP60510 307 aa9.2□□□□□ -0.94
CUX2-203ENST00000551604 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
CUX2-203ENST00000551604 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
CUX2-203ENST00000551604 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
CUX2-203ENST00000551604 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
CUX2-203ENST00000551604 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
CUX2-203ENST00000551604 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
CUX2-203ENST00000551604 NUTM2DQ5VT03 806 aaPredicted RBP9.19□□□□□ -0.94
CUX2-203ENST00000551604 PRPF38BQ5VTL8 546 aaKnown RBP9.19□□□□□ -0.94
CUX2-203ENST00000551604 NUTM2AQ8IVF1 878 aaPredicted RBP9.19□□□□□ -0.94
CUX2-203ENST00000551604 TATDN2Q93075 761 aa9.19□□□□□ -0.94
CUX2-203ENST00000551604 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
CUX2-203ENST00000551604 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 AP1G2O75843 785 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 USP46P62068 366 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 PDE4CQ08493 712 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 RDH13Q8NBN7 331 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CUX2-203ENST00000551604 GDPD2Q9HCC8 539 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
CUX2-203ENST00000551604 MOXD2PA6NHM9 499 aa9.17□□□□□ -0.94
CUX2-203ENST00000551604 LILRB3O75022 631 aa9.17□□□□□ -0.94
CUX2-203ENST00000551604 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
CUX2-203ENST00000551604 ABL2P42684 1182 aa9.17□□□□□ -0.94
CUX2-203ENST00000551604 KDM4AO75164 1064 aa9.16□□□□□ -0.94
CUX2-203ENST00000551604 ZBTB3Q9H5J0 574 aa9.16□□□□□ -0.94
CUX2-203ENST00000551604 ACIN1Q9UKV3 1341 aaKnown RBP9.15□□□□□ -0.94
CUX2-203ENST00000551604 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
CUX2-203ENST00000551604 RNF40O75150 1001 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 NDUFV2P19404 249 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 QPCTQ16769 361 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
CUX2-203ENST00000551604 GFRA3O60609 400 aa9.12□□□□□ -0.95
CUX2-203ENST00000551604 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
CUX2-203ENST00000551604 FBXO31Q5XUX0 539 aaPredicted RBP9.12□□□□□ -0.95
CUX2-203ENST00000551604 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
CUX2-203ENST00000551604 NPM2Q86SE8 214 aaKnown RBP9.11□□□□□ -0.95
CUX2-203ENST00000551604 GLMNQ92990 594 aa9.11□□□□□ -0.95
CUX2-203ENST00000551604 MTRQ99707 1265 aa9.11□□□□□ -0.95
CUX2-203ENST00000551604 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
CUX2-203ENST00000551604 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
CUX2-203ENST00000551604 FDX1P10109 184 aa9.1□□□□□ -0.95
CUX2-203ENST00000551604 GCGRP47871 477 aa9.1□□□□□ -0.95
CUX2-203ENST00000551604 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
CUX2-203ENST00000551604 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
CUX2-203ENST00000551604 HELBQ8NG08 1087 aaPredicted RBP9.1□□□□□ -0.95
CUX2-203ENST00000551604 PRKD2Q9BZL6 878 aa9.1□□□□□ -0.95
CUX2-203ENST00000551604 LCE2BO14633 110 aa9.09□□□□□ -0.95
CUX2-203ENST00000551604 HOXA2O43364 376 aa9.09□□□□□ -0.95
CUX2-203ENST00000551604 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
CUX2-203ENST00000551604 RETREG2Q8NC44 543 aa9.08□□□□□ -0.96
CUX2-203ENST00000551604 CABLES1Q8TDN4 633 aa9.08□□□□□ -0.96
CUX2-203ENST00000551604 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
CUX2-203ENST00000551604 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
CUX2-203ENST00000551604 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
CUX2-203ENST00000551604 MTMR2Q13614 643 aa9.07□□□□□ -0.96
CUX2-203ENST00000551604 AEBP1Q8IUX7 1158 aa9.07□□□□□ -0.96
CUX2-203ENST00000551604 IL21Q9HBE4 155 aa9.07□□□□□ -0.96
CUX2-203ENST00000551604 APLP1P51693 650 aa9.06□□□□□ -0.96
CUX2-203ENST00000551604 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
CUX2-203ENST00000551604 NKX2-3Q8TAU0 364 aa9.05□□□□□ -0.96
CUX2-203ENST00000551604 POM121CA8CG34 1229 aa9.04□□□□□ -0.96
CUX2-203ENST00000551604 TRAF7Q6Q0C0 670 aa9.04□□□□□ -0.96
CUX2-203ENST00000551604 COPS2P61201 443 aa9.03□□□□□ -0.96
CUX2-203ENST00000551604 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
CUX2-203ENST00000551604 TSC1Q92574 1164 aa9.03□□□□□ -0.96
CUX2-203ENST00000551604 PBXIP1Q96AQ6 731 aa9.03□□□□□ -0.96
CUX2-203ENST00000551604 GJD4Q96KN9 370 aaPredicted RBP9.03□□□□□ -0.96
CUX2-203ENST00000551604 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
CUX2-203ENST00000551604 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
CUX2-203ENST00000551604 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.02□□□□□ -0.97
CUX2-203ENST00000551604 SOX11P35716 441 aa9.01□□□□□ -0.97
CUX2-203ENST00000551604 CTDSPL2Q05D32 466 aa9.01□□□□□ -0.97
CUX2-203ENST00000551604 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
CUX2-203ENST00000551604 C6orf229H3BNL8 230 aa9□□□□□ -0.97
CUX2-203ENST00000551604 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
CUX2-203ENST00000551604 NRG2O14511 850 aaPredicted RBP8.99□□□□□ -0.97
CUX2-203ENST00000551604 SLC10A3P09131 477 aa8.99□□□□□ -0.97
CUX2-203ENST00000551604 CSB-PGBD3P0DP91 1061 aa8.99□□□□□ -0.97
CUX2-203ENST00000551604 IRF5Q13568 498 aa8.99□□□□□ -0.97
CUX2-203ENST00000551604 USTQ9Y2C2 406 aa8.98□□□□□ -0.97
CUX2-203ENST00000551604 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
CUX2-203ENST00000551604 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
CUX2-203ENST00000551604 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
CUX2-203ENST00000551604 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
CUX2-203ENST00000551604 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
CUX2-203ENST00000551604 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
CUX2-203ENST00000551604 TMCO4Q5TGY1 634 aa8.96□□□□□ -0.98
CUX2-203ENST00000551604 PDZRN3Q9UPQ7 1066 aa8.96□□□□□ -0.98
CUX2-203ENST00000551604 CFHP08603 1231 aa8.95□□□□□ -0.98
CUX2-203ENST00000551604 VAC14Q08AM6 782 aa8.95□□□□□ -0.98
CUX2-203ENST00000551604 FUT2Q10981 343 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms