RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 NBPF3Q9H094 633 aa6.46□□□□□ -1.38
TMEM116-212ENST00000550800 CRISPLD2Q9H0B8 497 aa6.46□□□□□ -1.38
TMEM116-212ENST00000550800 SCUBE2Q9NQ36 999 aa6.46□□□□□ -1.38
TMEM116-212ENST00000550800 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.46□□□□□ -1.38
TMEM116-212ENST00000550800 UHRF1BP1LA0JNW5 1464 aa6.46□□□□□ -1.38
TMEM116-212ENST00000550800 PRDM2Q13029 1718 aa6.45□□□□□ -1.38
TMEM116-212ENST00000550800 RBM25P49756 843 aaKnown RBP6.45□□□□□ -1.38
TMEM116-212ENST00000550800 CERS3Q8IU89 383 aa6.45□□□□□ -1.38
TMEM116-212ENST00000550800 NCAPGQ9BPX3 1015 aa6.45□□□□□ -1.38
TMEM116-212ENST00000550800 DDX11L8A8MPP1 907 aa6.44□□□□□ -1.38
TMEM116-212ENST00000550800 ZNF500O60304 480 aaPredicted RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 HSPA5P11021 654 aaKnown RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 OS9Q13438 667 aaPredicted RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 MFSD10Q14728 455 aa6.44□□□□□ -1.38
TMEM116-212ENST00000550800 SKOR2Q2VWA4 1001 aaPredicted RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 SASS6Q6UVJ0 657 aa6.44□□□□□ -1.38
TMEM116-212ENST00000550800 DCAF11Q8TEB1 546 aa6.44□□□□□ -1.38
TMEM116-212ENST00000550800 DDX27Q96GQ7 796 aaKnown RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 PRDM10Q9NQV6 1147 aa6.44□□□□□ -1.38
TMEM116-212ENST00000550800 GPHNQ9NQX3 736 aaPredicted RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 THOC2Q8NI27 1593 aaKnown RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
TMEM116-212ENST00000550800 IGSF3O75054 1194 aa6.43□□□□□ -1.38
TMEM116-212ENST00000550800 CCDC172P0C7W6 258 aa6.43□□□□□ -1.38
TMEM116-212ENST00000550800 CADPS2Q86UW7 1296 aa6.43□□□□□ -1.38
TMEM116-212ENST00000550800 SMC4Q9NTJ3 1288 aa6.43□□□□□ -1.38
TMEM116-212ENST00000550800 ZHX1Q9UKY1 873 aaPredicted RBP6.43□□□□□ -1.38
TMEM116-212ENST00000550800 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
TMEM116-212ENST00000550800 CEP162Q5TB80 1403 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 RSF1Q96T23 1441 aaPredicted RBP6.42□□□□□ -1.38
TMEM116-212ENST00000550800 YEATS2Q9ULM3 1422 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 KIAA1107Q9UPP5 1409 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 TULP2O00295 520 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 UBTFP17480 764 aaKnown RBP6.42□□□□□ -1.38
TMEM116-212ENST00000550800 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
TMEM116-212ENST00000550800 TSHZ1Q6ZSZ6 1077 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 BANK1Q8NDB2 785 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 MED4Q9NPJ6 270 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 KIF16BQ96L93 1317 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 NCKAP5LQ9HCH0 1330 aa6.42□□□□□ -1.38
TMEM116-212ENST00000550800 PLEKHD1A6NEE1 506 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 TNNT3P45378 269 aaPredicted RBP6.41□□□□□ -1.38
TMEM116-212ENST00000550800 SARNPP82979 210 aaKnown RBP6.41□□□□□ -1.38
TMEM116-212ENST00000550800 FOXK1P85037 733 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 SYCP1Q15431 976 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 SLC26A8Q96RN1 970 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 LARP6Q9BRS8 491 aaKnown RBP6.41□□□□□ -1.38
TMEM116-212ENST00000550800 UPF2Q9HAU5 1272 aaKnown RBP6.41□□□□□ -1.38
TMEM116-212ENST00000550800 KCNG1Q9UIX4 513 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 NUB1Q9Y5A7 615 aa6.41□□□□□ -1.38
TMEM116-212ENST00000550800 POTEMA6NI47 508 aa6.4□□□□□ -1.38
TMEM116-212ENST00000550800 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.38
TMEM116-212ENST00000550800 EIF3JO75822 258 aaKnown RBP6.4□□□□□ -1.38
TMEM116-212ENST00000550800 BRPF1P55201 1214 aaPredicted RBP6.4□□□□□ -1.38
TMEM116-212ENST00000550800 PPP1R15BQ5SWA1 713 aa6.4□□□□□ -1.38
TMEM116-212ENST00000550800 ITFG2Q969R8 447 aa6.4□□□□□ -1.38
TMEM116-212ENST00000550800 PPP1R9BQ96SB3 815 aa6.4□□□□□ -1.38
TMEM116-212ENST00000550800 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.38
TMEM116-212ENST00000550800 CCDC196A0A1B0GTZ2 297 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 ZNF853P0CG23 659 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 E2F4Q16254 413 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
TMEM116-212ENST00000550800 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.39□□□□□ -1.39
TMEM116-212ENST00000550800 SNRNP27Q8WVK2 155 aaKnown RBP6.39□□□□□ -1.39
TMEM116-212ENST00000550800 HIRIP3Q9BW71 556 aaPredicted RBP6.39□□□□□ -1.39
TMEM116-212ENST00000550800 FAM13BQ9NYF5 915 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 DONSONQ9NYP3 566 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 ZMYM4Q5VZL5 1548 aa6.39□□□□□ -1.39
TMEM116-212ENST00000550800 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 CTAGE5O15320 804 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 SETSIPP0DME0 302 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 XRCC6P12956 609 aaKnown RBP eCLIP6.38□□□□□ -1.39
TMEM116-212ENST00000550800 HNRNPUQ00839 825 aaKnown RBP eCLIP6.38□□□□□ -1.39
TMEM116-212ENST00000550800 MTA1Q13330 715 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 HSP90B2PQ58FF3 399 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 CCDC91Q7Z6B0 441 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 GRPEL1Q9HAV7 217 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 CGNQ9P2M7 1197 aaKnown RBP6.38□□□□□ -1.39
TMEM116-212ENST00000550800 NESP48681 1621 aa6.38□□□□□ -1.39
TMEM116-212ENST00000550800 POLR1AO95602 1720 aaPredicted RBP6.38□□□□□ -1.39
TMEM116-212ENST00000550800 ABCA5Q8WWZ7 1642 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 UQCRHLA0A096LP55 91 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 PPP1R12AO14974 1030 aaPredicted RBP6.37□□□□□ -1.39
TMEM116-212ENST00000550800 UQCRHP07919 91 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 ERCC3P19447 782 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 RIPK4P57078 832 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 IRX6P78412 446 aaPredicted RBP6.37□□□□□ -1.39
TMEM116-212ENST00000550800 NUTM1Q86Y26 1132 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 MSL3Q8N5Y2 521 aaKnown RBP6.37□□□□□ -1.39
TMEM116-212ENST00000550800 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 PRDM16Q9HAZ2 1276 aa6.37□□□□□ -1.39
TMEM116-212ENST00000550800 RAD54L2Q9Y4B4 1467 aa6.36□□□□□ -1.39
TMEM116-212ENST00000550800 INSRP06213 1382 aa6.36□□□□□ -1.39
TMEM116-212ENST00000550800 ZRANB2O95218 330 aaKnown RBP eCLIP6.36□□□□□ -1.39
TMEM116-212ENST00000550800 GTF2A1P52655 376 aaPredicted RBP6.36□□□□□ -1.39
TMEM116-212ENST00000550800 CAMK2BQ13554 666 aa6.36□□□□□ -1.39
TMEM116-212ENST00000550800 RABEP1Q15276 862 aa6.36□□□□□ -1.39
TMEM116-212ENST00000550800 FAM43BQ6ZT52 329 aaPredicted RBP6.36□□□□□ -1.39
TMEM116-212ENST00000550800 ZNF771Q7L3S4 317 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms