RNA–Protein interactions for RNA: ENST00000550359.6

PPFIA2-219, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 3,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-219ENST00000550359 LNPKQ9C0E8 428 aa8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 ZKSCAN5Q9Y2L8 839 aa8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 ERBINQ96RT1 1412 aa8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 ATP2B3Q16720 1220 aa8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 ZNF830Q96NB3 372 aaPredicted RBP8.23□□□□□ -1.09
PPFIA2-219ENST00000550359 INSRP06213 1382 aa8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 KLHL40Q2TBA0 621 aa8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 C17orf53Q8N3J3 647 aaPredicted RBP8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 PKP1Q13835 747 aa8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 MTERF4Q7Z6M4 381 aaKnown RBP8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 ANKRD50Q9ULJ7 1429 aa8.22□□□□□ -1.09
PPFIA2-219ENST00000550359 PRPF40AO75400 957 aaKnown RBP8.21□□□□□ -1.09
PPFIA2-219ENST00000550359 MAGI2Q86UL8 1455 aa8.21□□□□□ -1.09
PPFIA2-219ENST00000550359 UTP14CQ5TAP6 766 aaKnown RBP8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 CIZ1Q9ULV3 898 aaPredicted RBP8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 SYCE3A1L190 88 aa8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 COL17A1Q9UMD9 1497 aaPredicted RBP8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 SAMD9Q5K651 1589 aa8.21□□□□□ -1.1
PPFIA2-219ENST00000550359 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 PHF23Q9BUL5 403 aaPredicted RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 SNX21Q969T3 373 aa8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 ANKRD30AQ9BXX3 1397 aa8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 MVPQ14764 893 aaKnown RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 KIF2CQ99661 725 aa8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 CGNQ9P2M7 1197 aaKnown RBP8.2□□□□□ -1.1
PPFIA2-219ENST00000550359 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 NCOA3Q9Y6Q9 1424 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 PDLIM2Q96JY6 352 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 NSFL1CQ9UNZ2 370 aaKnown RBP8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 PTMSP20962 102 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 ILDR1Q86SU0 546 aaPredicted RBP8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 TMEM51Q9NW97 253 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
PPFIA2-219ENST00000550359 ZNF445P59923 1031 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 FOXD4L6Q3SYB3 417 aaPredicted RBP8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 FOXD4L3Q6VB84 417 aaPredicted RBP8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 LMBRD1Q9NUN5 540 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 HS1BP3Q53T59 392 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 CCDC39Q9UFE4 941 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 GPT2Q8TD30 523 aa8.18□□□□□ -1.1
PPFIA2-219ENST00000550359 MYRIPQ8NFW9 859 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 PRG4Q92954 1404 aaPredicted RBP8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 KIAA2012Q0VF49 1180 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 ZKSCAN2Q63HK3 967 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 CHD1O14646 1710 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 GAPVD1Q14C86 1478 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 U2AF2P26368 475 aaKnown RBP eCLIP8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 HNRNPMP52272 730 aaKnown RBP eCLIP8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 SMC4Q9NTJ3 1288 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 ARHGEF12Q9NZN5 1544 aa8.17□□□□□ -1.1
PPFIA2-219ENST00000550359 AK9Q5TCS8 1911 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 ZNF771Q7L3S4 317 aaPredicted RBP8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 TSPY4P0CV99 314 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 TSPY10P0CW01 314 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 ANKRD45Q5TZF3 282 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 TTC12Q9H892 705 aaPredicted RBP8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 NINLQ9Y2I6 1382 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 CCDC144AA2RUR9 1427 aa8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 ZGPATQ8N5A5 531 aaKnown RBP8.16□□□□□ -1.1
PPFIA2-219ENST00000550359 PLCB2Q00722 1185 aa8.15□□□□□ -1.1
PPFIA2-219ENST00000550359 KIF20AO95235 890 aa8.15□□□□□ -1.1
PPFIA2-219ENST00000550359 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
PPFIA2-219ENST00000550359 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
PPFIA2-219ENST00000550359 CUL7Q14999 1698 aa8.15□□□□□ -1.1
PPFIA2-219ENST00000550359 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.11
PPFIA2-219ENST00000550359 TRIM27P14373 513 aa8.15□□□□□ -1.11
PPFIA2-219ENST00000550359 BCL2L12Q9HB09 334 aa8.15□□□□□ -1.11
PPFIA2-219ENST00000550359 WDR7Q9Y4E6 1490 aa8.15□□□□□ -1.11
PPFIA2-219ENST00000550359 PDCL2Q8N4E4 241 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 TMEM57Q8N5G2 664 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 LRSAM1Q6UWE0 723 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 KIF3AQ9Y496 699 aa8.14□□□□□ -1.11
PPFIA2-219ENST00000550359 FAM135AQ9P2D6 1515 aa8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 CDK11BP21127 795 aaKnown RBP8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 NOLC1Q14978 699 aaKnown RBP eCLIP8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 CHD1LQ86WJ1 897 aa8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 NOB1Q9ULX3 412 aaKnown RBP8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 MCM5P33992 734 aa8.13□□□□□ -1.11
PPFIA2-219ENST00000550359 EXOSC9Q06265 439 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms