RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
RAB5B-206ENST00000549505 DIP2AQ14689 1571 aa13.46□□□□□ -0.25
RAB5B-206ENST00000549505 EVC2Q86UK5 1308 aa13.46□□□□□ -0.25
RAB5B-206ENST00000549505 NGEFQ8N5V2 710 aa13.45□□□□□ -0.26
RAB5B-206ENST00000549505 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
RAB5B-206ENST00000549505 TNRQ92752 1358 aa13.45□□□□□ -0.26
RAB5B-206ENST00000549505 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
RAB5B-206ENST00000549505 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
RAB5B-206ENST00000549505 ATP7BP35670 1465 aa13.44□□□□□ -0.26
RAB5B-206ENST00000549505 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
RAB5B-206ENST00000549505 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
RAB5B-206ENST00000549505 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
RAB5B-206ENST00000549505 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
RAB5B-206ENST00000549505 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
RAB5B-206ENST00000549505 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 NEFLP07196 543 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
RAB5B-206ENST00000549505 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
RAB5B-206ENST00000549505 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
RAB5B-206ENST00000549505 FKBP8Q14318 412 aa13.4□□□□□ -0.26
RAB5B-206ENST00000549505 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
RAB5B-206ENST00000549505 IQSEC2Q5JU85 1478 aa13.39□□□□□ -0.27
RAB5B-206ENST00000549505 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
RAB5B-206ENST00000549505 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
RAB5B-206ENST00000549505 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
RAB5B-206ENST00000549505 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
RAB5B-206ENST00000549505 AKAP12Q02952 1782 aa13.39□□□□□ -0.27
RAB5B-206ENST00000549505 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
RAB5B-206ENST00000549505 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-206ENST00000549505 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
RAB5B-206ENST00000549505 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
RAB5B-206ENST00000549505 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
RAB5B-206ENST00000549505 NRKQ7Z2Y5 1582 aa13.36□□□□□ -0.27
RAB5B-206ENST00000549505 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
RAB5B-206ENST00000549505 A0A1W2PP64 1363 aa13.35□□□□□ -0.27
RAB5B-206ENST00000549505 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
RAB5B-206ENST00000549505 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
RAB5B-206ENST00000549505 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.27
RAB5B-206ENST00000549505 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.27
RAB5B-206ENST00000549505 METP08581 1390 aa13.33□□□□□ -0.28
RAB5B-206ENST00000549505 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
RAB5B-206ENST00000549505 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
RAB5B-206ENST00000549505 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
RAB5B-206ENST00000549505 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-206ENST00000549505 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
RAB5B-206ENST00000549505 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
RAB5B-206ENST00000549505 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
RAB5B-206ENST00000549505 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
RAB5B-206ENST00000549505 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
RAB5B-206ENST00000549505 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
RAB5B-206ENST00000549505 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
RAB5B-206ENST00000549505 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
RAB5B-206ENST00000549505 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
RAB5B-206ENST00000549505 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
RAB5B-206ENST00000549505 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
RAB5B-206ENST00000549505 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.28
RAB5B-206ENST00000549505 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.28
RAB5B-206ENST00000549505 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
RAB5B-206ENST00000549505 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
RAB5B-206ENST00000549505 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
RAB5B-206ENST00000549505 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
RAB5B-206ENST00000549505 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
RAB5B-206ENST00000549505 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
RAB5B-206ENST00000549505 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
RAB5B-206ENST00000549505 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
RAB5B-206ENST00000549505 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
RAB5B-206ENST00000549505 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
RAB5B-206ENST00000549505 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
RAB5B-206ENST00000549505 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
RAB5B-206ENST00000549505 POGKQ9P215 609 aa13.24□□□□□ -0.29
RAB5B-206ENST00000549505 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
RAB5B-206ENST00000549505 FYB1O15117 783 aa13.24□□□□□ -0.29
RAB5B-206ENST00000549505 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
RAB5B-206ENST00000549505 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
RAB5B-206ENST00000549505 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
RAB5B-206ENST00000549505 MLECQ14165 292 aa13.22□□□□□ -0.29
RAB5B-206ENST00000549505 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
RAB5B-206ENST00000549505 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
RAB5B-206ENST00000549505 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
RAB5B-206ENST00000549505 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
RAB5B-206ENST00000549505 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
RAB5B-206ENST00000549505 LTKP29376 864 aa13.21□□□□□ -0.29
RAB5B-206ENST00000549505 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
RAB5B-206ENST00000549505 FMN2Q9NZ56 1722 aa13.21□□□□□ -0.29
RAB5B-206ENST00000549505 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.3
RAB5B-206ENST00000549505 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.3
RAB5B-206ENST00000549505 GOLGA2Q08379 1002 aa13.21□□□□□ -0.3
RAB5B-206ENST00000549505 STK26Q9P289 416 aa13.21□□□□□ -0.3
RAB5B-206ENST00000549505 SRPK2P78362 688 aaKnown RBP13.2□□□□□ -0.3
RAB5B-206ENST00000549505 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
RAB5B-206ENST00000549505 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
RAB5B-206ENST00000549505 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
RAB5B-206ENST00000549505 E9PSI1 815 aa13.19□□□□□ -0.3
RAB5B-206ENST00000549505 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-206ENST00000549505 MTHFSP49914 203 aa13.19□□□□□ -0.3
RAB5B-206ENST00000549505 CDCA7LQ96GN5 454 aa13.19□□□□□ -0.3
RAB5B-206ENST00000549505 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms