RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 RAPGEF3O95398 923 aa8.66□□□□□ -1.02
NPIPB12-203ENST00000548346 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.02
NPIPB12-203ENST00000548346 PADI6Q6TGC4 694 aa8.65□□□□□ -1.02
NPIPB12-203ENST00000548346 PACS2Q86VP3 889 aa8.65□□□□□ -1.02
NPIPB12-203ENST00000548346 WBP1LQ9NX94 342 aa8.65□□□□□ -1.02
NPIPB12-203ENST00000548346 YEATS2Q9ULM3 1422 aa8.64□□□□□ -1.03
NPIPB12-203ENST00000548346 ARID4BQ4LE39 1312 aaPredicted RBP8.64□□□□□ -1.03
NPIPB12-203ENST00000548346 TATDN2Q93075 761 aa8.64□□□□□ -1.03
NPIPB12-203ENST00000548346 ABCA9Q8IUA7 1624 aa8.64□□□□□ -1.03
NPIPB12-203ENST00000548346 P3H3Q8IVL6 736 aa8.63□□□□□ -1.03
NPIPB12-203ENST00000548346 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
NPIPB12-203ENST00000548346 HAP1P54257 671 aaPredicted RBP8.62□□□□□ -1.03
NPIPB12-203ENST00000548346 IQSEC2Q5JU85 1478 aa8.62□□□□□ -1.03
NPIPB12-203ENST00000548346 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
NPIPB12-203ENST00000548346 TTC37Q6PGP7 1564 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 PTGDRQ13258 359 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 PNMA3Q9UL41 463 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 RAPGEF2Q9Y4G8 1499 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 FHOD3Q2V2M9 1422 aa8.61□□□□□ -1.03
NPIPB12-203ENST00000548346 FANCAO15360 1455 aa8.6□□□□□ -1.03
NPIPB12-203ENST00000548346 GOLGA3Q08378 1498 aa8.6□□□□□ -1.03
NPIPB12-203ENST00000548346 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
NPIPB12-203ENST00000548346 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
NPIPB12-203ENST00000548346 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
NPIPB12-203ENST00000548346 ATP10BO94823 1461 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 PTPRTO14522 1441 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
NPIPB12-203ENST00000548346 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
NPIPB12-203ENST00000548346 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
NPIPB12-203ENST00000548346 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
NPIPB12-203ENST00000548346 TSR3Q9UJK0 312 aaKnown RBP8.58□□□□□ -1.04
NPIPB12-203ENST00000548346 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
NPIPB12-203ENST00000548346 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
NPIPB12-203ENST00000548346 PREX1Q8TCU6 1659 aa8.57□□□□□ -1.04
NPIPB12-203ENST00000548346 EYA1Q99502 592 aa8.57□□□□□ -1.04
NPIPB12-203ENST00000548346 RICTORQ6R327 1708 aa8.57□□□□□ -1.04
NPIPB12-203ENST00000548346 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
NPIPB12-203ENST00000548346 ARHGEF12Q9NZN5 1544 aa8.56□□□□□ -1.04
NPIPB12-203ENST00000548346 RBM26Q5T8P6 1007 aaKnown RBP8.56□□□□□ -1.04
NPIPB12-203ENST00000548346 MAGI2Q86UL8 1455 aa8.56□□□□□ -1.04
NPIPB12-203ENST00000548346 EFCAB5A4FU69 1503 aa8.55□□□□□ -1.04
NPIPB12-203ENST00000548346 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
NPIPB12-203ENST00000548346 ZFYVE16Q7Z3T8 1539 aa8.54□□□□□ -1.04
NPIPB12-203ENST00000548346 FER1L4A9Z1Z3 1794 aa8.54□□□□□ -1.04
NPIPB12-203ENST00000548346 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
NPIPB12-203ENST00000548346 GPR37O15354 613 aa8.54□□□□□ -1.04
NPIPB12-203ENST00000548346 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
NPIPB12-203ENST00000548346 A0A0G2JS52 829 aa8.53□□□□□ -1.04
NPIPB12-203ENST00000548346 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
NPIPB12-203ENST00000548346 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
NPIPB12-203ENST00000548346 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
NPIPB12-203ENST00000548346 CTTNBP2Q8WZ74 1663 aa8.51□□□□□ -1.05
NPIPB12-203ENST00000548346 CFAP74Q9C0B2 1584 aa8.51□□□□□ -1.05
NPIPB12-203ENST00000548346 FECHP22830 423 aa8.5□□□□□ -1.05
NPIPB12-203ENST00000548346 APLP1P51693 650 aa8.5□□□□□ -1.05
NPIPB12-203ENST00000548346 PPP4CP60510 307 aa8.5□□□□□ -1.05
NPIPB12-203ENST00000548346 NCOA1Q15788 1441 aa8.49□□□□□ -1.05
NPIPB12-203ENST00000548346 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
NPIPB12-203ENST00000548346 MLECQ14165 292 aa8.49□□□□□ -1.05
NPIPB12-203ENST00000548346 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
NPIPB12-203ENST00000548346 MED1Q15648 1581 aaPredicted RBP8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 C9orf84Q5VXU9 1444 aa8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 HECW1Q76N89 1606 aa8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 FCHSD2O94868 740 aa8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 ATP10AO60312 1499 aa8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
NPIPB12-203ENST00000548346 RNF40O75150 1001 aa8.47□□□□□ -1.05
NPIPB12-203ENST00000548346 VSIG10Q8N0Z9 540 aa8.47□□□□□ -1.05
NPIPB12-203ENST00000548346 NUP153P49790 1475 aaKnown RBP8.46□□□□□ -1.05
NPIPB12-203ENST00000548346 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.06
NPIPB12-203ENST00000548346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 RAPGEF6Q8TEU7 1601 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 HRCP23327 699 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 KCNC4Q03721 635 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 MTRQ99707 1265 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
NPIPB12-203ENST00000548346 LOC105371045A0A1W2PR82 267 aa8.44□□□□□ -1.06
NPIPB12-203ENST00000548346 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
NPIPB12-203ENST00000548346 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
NPIPB12-203ENST00000548346 ZNF516Q92618 1163 aa8.44□□□□□ -1.06
NPIPB12-203ENST00000548346 TRAPPC8Q9Y2L5 1435 aa8.44□□□□□ -1.06
NPIPB12-203ENST00000548346 DNAJB2P25686 324 aa8.43□□□□□ -1.06
NPIPB12-203ENST00000548346 HIC1Q14526 733 aa8.43□□□□□ -1.06
NPIPB12-203ENST00000548346 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
NPIPB12-203ENST00000548346 SCAPERQ9BY12 1400 aa8.43□□□□□ -1.06
NPIPB12-203ENST00000548346 SAMD9Q5K651 1589 aa8.43□□□□□ -1.06
NPIPB12-203ENST00000548346 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
NPIPB12-203ENST00000548346 REREQ9P2R6 1566 aa8.42□□□□□ -1.06
NPIPB12-203ENST00000548346 PLCH2O75038 1416 aa8.41□□□□□ -1.06
NPIPB12-203ENST00000548346 ZNF335Q9H4Z2 1342 aaPredicted RBP8.41□□□□□ -1.06
NPIPB12-203ENST00000548346 PLEKHD1A6NEE1 506 aa8.41□□□□□ -1.06
NPIPB12-203ENST00000548346 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms