RNA–Protein interactions for RNA: ENST00000548324.5

ACSS3-204, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 2

Gene ACSS3, Length 2,214 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-204ENST00000548324 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
ACSS3-204ENST00000548324 ITGAEP38570 1179 aa11.38□□□□□ -0.59
ACSS3-204ENST00000548324 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
ACSS3-204ENST00000548324 TRIM52Q96A61 297 aa11.37□□□□□ -0.59
ACSS3-204ENST00000548324 CHMP4BQ9H444 224 aaKnown RBP11.37□□□□□ -0.59
ACSS3-204ENST00000548324 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
ACSS3-204ENST00000548324 SIN3AQ96ST3 1273 aa11.36□□□□□ -0.59
ACSS3-204ENST00000548324 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
ACSS3-204ENST00000548324 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
ACSS3-204ENST00000548324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.591e-7■■□□□ 11.8
ACSS3-204ENST00000548324 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
ACSS3-204ENST00000548324 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
ACSS3-204ENST00000548324 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
ACSS3-204ENST00000548324 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
ACSS3-204ENST00000548324 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.59
ACSS3-204ENST00000548324 LONRF3Q496Y0 759 aa11.33□□□□□ -0.59
ACSS3-204ENST00000548324 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.59
ACSS3-204ENST00000548324 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
ACSS3-204ENST00000548324 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
ACSS3-204ENST00000548324 TONSLQ96HA7 1378 aa11.33□□□□□ -0.6
ACSS3-204ENST00000548324 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
ACSS3-204ENST00000548324 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
ACSS3-204ENST00000548324 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
ACSS3-204ENST00000548324 PARNO95453 639 aaKnown RBP11.32□□□□□ -0.6
ACSS3-204ENST00000548324 ERCC3P19447 782 aa11.32□□□□□ -0.6
ACSS3-204ENST00000548324 CREB3O43889 395 aa11.32□□□□□ -0.6
ACSS3-204ENST00000548324 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
ACSS3-204ENST00000548324 PAX3P23760 479 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 UBA5Q9GZZ9 404 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 PNMA2Q9UL42 364 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
ACSS3-204ENST00000548324 E2F4Q16254 413 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 SMYD5Q6GMV2 418 aa11.31□□□□□ -0.6
ACSS3-204ENST00000548324 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
ACSS3-204ENST00000548324 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
ACSS3-204ENST00000548324 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
ACSS3-204ENST00000548324 KDM6BO15054 1643 aa11.3□□□□□ -0.6
ACSS3-204ENST00000548324 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
ACSS3-204ENST00000548324 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
ACSS3-204ENST00000548324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
ACSS3-204ENST00000548324 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 FGD6Q6ZV73 1430 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 NAALADL2Q58DX5 795 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 ZFYVE27Q5T4F4 411 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 KRBA2Q6ZNG9 492 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 PMM1Q92871 262 aa11.29□□□□□ -0.6
ACSS3-204ENST00000548324 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
ACSS3-204ENST00000548324 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
ACSS3-204ENST00000548324 PHF14O94880 888 aa11.28□□□□□ -0.6
ACSS3-204ENST00000548324 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
ACSS3-204ENST00000548324 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
ACSS3-204ENST00000548324 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
ACSS3-204ENST00000548324 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 HECW2Q9P2P5 1572 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 GCC2Q8IWJ2 1684 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
ACSS3-204ENST00000548324 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.61
ACSS3-204ENST00000548324 CDC42BPBQ9Y5S2 1711 aa11.26□□□□□ -0.61
ACSS3-204ENST00000548324 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
ACSS3-204ENST00000548324 SH3BP5O60239 455 aa11.26□□□□□ -0.61
ACSS3-204ENST00000548324 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
ACSS3-204ENST00000548324 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
ACSS3-204ENST00000548324 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
ACSS3-204ENST00000548324 AKNAQ7Z591 1439 aa11.25□□□□□ -0.61
ACSS3-204ENST00000548324 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
ACSS3-204ENST00000548324 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 APLP1P51693 650 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 GPATCH8Q9UKJ3 1502 aaKnown RBP11.24□□□□□ -0.61
ACSS3-204ENST00000548324 NAIPQ13075 1403 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 KIF4AO95239 1232 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 TSHZ1Q6ZSZ6 1077 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 PREX2Q70Z35 1606 aa11.24□□□□□ -0.61
ACSS3-204ENST00000548324 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
ACSS3-204ENST00000548324 CCDC181Q5TID7 509 aa11.23□□□□□ -0.61
ACSS3-204ENST00000548324 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
ACSS3-204ENST00000548324 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
ACSS3-204ENST00000548324 PCMTD1Q96MG8 357 aaPredicted RBP11.23□□□□□ -0.61
ACSS3-204ENST00000548324 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
ACSS3-204ENST00000548324 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
ACSS3-204ENST00000548324 PSME1Q06323 249 aa11.22□□□□□ -0.61
ACSS3-204ENST00000548324 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
ACSS3-204ENST00000548324 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
ACSS3-204ENST00000548324 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
ACSS3-204ENST00000548324 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
ACSS3-204ENST00000548324 HMGB1P1B2RPK0 211 aaPredicted RBP11.21□□□□□ -0.61
ACSS3-204ENST00000548324 DNAJC14Q6Y2X3 702 aaPredicted RBP11.21□□□□□ -0.61
ACSS3-204ENST00000548324 METTL14Q9HCE5 456 aaKnown RBP11.21□□□□□ -0.61
ACSS3-204ENST00000548324 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.61
ACSS3-204ENST00000548324 PPRC1Q5VV67 1664 aaKnown RBP11.21□□□□□ -0.61
ACSS3-204ENST00000548324 TBC1D12O60347 775 aa11.21□□□□□ -0.62
ACSS3-204ENST00000548324 CDCA8Q53HL2 280 aa11.21□□□□□ -0.62
ACSS3-204ENST00000548324 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms