RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
TMEM116-206ENST00000548283 MON2Q7Z3U7 1717 aa10.11□□□□□ -0.79
TMEM116-206ENST00000548283 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
TMEM116-206ENST00000548283 CHD2O14647 1828 aaKnown RBP10.1□□□□□ -0.79
TMEM116-206ENST00000548283 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
TMEM116-206ENST00000548283 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
TMEM116-206ENST00000548283 LRRC7Q96NW7 1537 aa10.1□□□□□ -0.79
TMEM116-206ENST00000548283 WASHC2CQ9Y4E1 1318 aa10.09□□□□□ -0.79
TMEM116-206ENST00000548283 SIRT1Q96EB6 747 aa10.09□□□□□ -0.79
TMEM116-206ENST00000548283 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
TMEM116-206ENST00000548283 CFAP65Q6ZU64 1925 aaKnown RBP10.08□□□□□ -0.8
TMEM116-206ENST00000548283 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
TMEM116-206ENST00000548283 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
TMEM116-206ENST00000548283 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
TMEM116-206ENST00000548283 CDC42BPGQ6DT37 1551 aa10.07□□□□□ -0.8
TMEM116-206ENST00000548283 DCAF11Q8TEB1 546 aa10.06□□□□□ -0.8
TMEM116-206ENST00000548283 ADAMTS13Q76LX8 1427 aa10.06□□□□□ -0.8
TMEM116-206ENST00000548283 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
TMEM116-206ENST00000548283 PLEKHG1Q9ULL1 1385 aa10.06□□□□□ -0.8
TMEM116-206ENST00000548283 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
TMEM116-206ENST00000548283 MSH5O43196 834 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 ADGRF5Q8IZF2 1346 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 ITSN1Q15811 1721 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.05□□□□□ -0.8
TMEM116-206ENST00000548283 PTCH1Q13635 1447 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
TMEM116-206ENST00000548283 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
TMEM116-206ENST00000548283 RIMS2Q9UQ26 1411 aa10.04□□□□□ -0.8
TMEM116-206ENST00000548283 TNRQ92752 1358 aa10.04□□□□□ -0.8
TMEM116-206ENST00000548283 NINLQ9Y2I6 1382 aa10.04□□□□□ -0.8
TMEM116-206ENST00000548283 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
TMEM116-206ENST00000548283 PER1O15534 1290 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-206ENST00000548283 IDI1Q13907 227 aa10.03□□□□□ -0.8
TMEM116-206ENST00000548283 TMEM2Q9UHN6 1383 aa10.03□□□□□ -0.8
TMEM116-206ENST00000548283 PPP4R3CPQ6ZMV5 832 aa10.03□□□□□ -0.8
TMEM116-206ENST00000548283 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
TMEM116-206ENST00000548283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMEM116-206ENST00000548283 FMN2Q9NZ56 1722 aa10.03□□□□□ -0.8
TMEM116-206ENST00000548283 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.81
TMEM116-206ENST00000548283 NBPF1Q3BBV0 1214 aa10.02□□□□□ -0.81
TMEM116-206ENST00000548283 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
TMEM116-206ENST00000548283 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
TMEM116-206ENST00000548283 PIK3R4Q99570 1358 aa10.01□□□□□ -0.81
TMEM116-206ENST00000548283 BRD2P25440 801 aaKnown RBP10.01□□□□□ -0.81
TMEM116-206ENST00000548283 NECTIN2Q92692 538 aa10.01□□□□□ -0.81
TMEM116-206ENST00000548283 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
TMEM116-206ENST00000548283 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
TMEM116-206ENST00000548283 SETD1BQ9UPS6 1966 aaKnown RBP10□□□□□ -0.81
TMEM116-206ENST00000548283 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
TMEM116-206ENST00000548283 CARD11Q9BXL7 1154 aa9.99□□□□□ -0.81
TMEM116-206ENST00000548283 ATP7BP35670 1465 aa9.99□□□□□ -0.81
TMEM116-206ENST00000548283 GGT6Q6P531 493 aa9.98□□□□□ -0.81
TMEM116-206ENST00000548283 ST20-MTHFSA0A0A6YYL1 179 aa9.97□□□□□ -0.81
TMEM116-206ENST00000548283 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-206ENST00000548283 STRCQ7RTU9 1775 aa9.97□□□□□ -0.81
TMEM116-206ENST00000548283 MST1RQ04912 1400 aa9.97□□□□□ -0.81
TMEM116-206ENST00000548283 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.81
TMEM116-206ENST00000548283 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.81
TMEM116-206ENST00000548283 CRYBG1Q9Y4K1 1723 aa9.95□□□□□ -0.82
TMEM116-206ENST00000548283 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.95□□□□□ -0.82
TMEM116-206ENST00000548283 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
TMEM116-206ENST00000548283 BLMP54132 1417 aaPredicted RBP9.95□□□□□ -0.82
TMEM116-206ENST00000548283 CNKSR2Q8WXI2 1034 aa9.95□□□□□ -0.82
TMEM116-206ENST00000548283 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
TMEM116-206ENST00000548283 PTPRUQ92729 1446 aa9.95□□□□□ -0.82
TMEM116-206ENST00000548283 NEFLP07196 543 aa9.95□□□□□ -0.82
TMEM116-206ENST00000548283 STRCP1A6NGW2 1772 aa9.94□□□□□ -0.82
TMEM116-206ENST00000548283 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-206ENST00000548283 PRKRIP1Q9H875 184 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-206ENST00000548283 BRD4O60885 1362 aaPredicted RBP9.94□□□□□ -0.82
TMEM116-206ENST00000548283 NSD2O96028 1365 aa9.94□□□□□ -0.82
TMEM116-206ENST00000548283 RGPD1P0DJD0 1748 aa9.94□□□□□ -0.82
TMEM116-206ENST00000548283 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
TMEM116-206ENST00000548283 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
TMEM116-206ENST00000548283 COL3A1P02461 1466 aaPredicted RBP9.92□□□□□ -0.82
TMEM116-206ENST00000548283 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
TMEM116-206ENST00000548283 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
TMEM116-206ENST00000548283 RBM25P49756 843 aaKnown RBP9.92□□□□□ -0.82
TMEM116-206ENST00000548283 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
TMEM116-206ENST00000548283 CDCA8Q53HL2 280 aa9.92□□□□□ -0.82
TMEM116-206ENST00000548283 TMF1P82094 1093 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
TMEM116-206ENST00000548283 NCOA3Q9Y6Q9 1424 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 ANKRD36BQ8N2N9 1353 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 TAF7LQ5H9L4 462 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 PKNOX2Q96KN3 472 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 METP08581 1390 aa9.91□□□□□ -0.82
TMEM116-206ENST00000548283 HSP90B1P14625 803 aaKnown RBP9.9□□□□□ -0.82
TMEM116-206ENST00000548283 RALBP1Q15311 655 aa9.9□□□□□ -0.82
TMEM116-206ENST00000548283 CAMTA1Q9Y6Y1 1673 aa9.9□□□□□ -0.82
TMEM116-206ENST00000548283 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.83
TMEM116-206ENST00000548283 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
TMEM116-206ENST00000548283 KIF1AQ12756 1690 aa9.9□□□□□ -0.83
TMEM116-206ENST00000548283 ANKARQ7Z5J8 1434 aa9.89□□□□□ -0.83
TMEM116-206ENST00000548283 DDX10Q13206 875 aaKnown RBP9.89□□□□□ -0.83
TMEM116-206ENST00000548283 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
TMEM116-206ENST00000548283 C1orf115Q9H7X2 142 aa9.89□□□□□ -0.83
TMEM116-206ENST00000548283 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
TMEM116-206ENST00000548283 USP35Q9P2H5 1018 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms