RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
PAAF1-215ENST00000544909 PREX1Q8TCU6 1659 aa16.28■□□□□ 0.2
PAAF1-215ENST00000544909 IQSEC2Q5JU85 1478 aa16.28■□□□□ 0.2
PAAF1-215ENST00000544909 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
PAAF1-215ENST00000544909 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
PAAF1-215ENST00000544909 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
PAAF1-215ENST00000544909 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
PAAF1-215ENST00000544909 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
PAAF1-215ENST00000544909 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
PAAF1-215ENST00000544909 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
PAAF1-215ENST00000544909 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 APAF1O14727 1248 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 TRAK1Q9UPV9 953 aa16.25■□□□□ 0.19
PAAF1-215ENST00000544909 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
PAAF1-215ENST00000544909 ABCC11Q96J66 1382 aa16.24■□□□□ 0.19
PAAF1-215ENST00000544909 PDE4AP27815 886 aa16.24■□□□□ 0.19
PAAF1-215ENST00000544909 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
PAAF1-215ENST00000544909 WDR63Q8IWG1 891 aa16.23■□□□□ 0.19
PAAF1-215ENST00000544909 ADGRB2O60241 1585 aa16.22■□□□□ 0.19
PAAF1-215ENST00000544909 PLIN1O60240 522 aa16.22■□□□□ 0.19
PAAF1-215ENST00000544909 RAPGEF3O95398 923 aa16.22■□□□□ 0.19
PAAF1-215ENST00000544909 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
PAAF1-215ENST00000544909 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
PAAF1-215ENST00000544909 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
PAAF1-215ENST00000544909 PTPRMP28827 1452 aa16.21■□□□□ 0.19
PAAF1-215ENST00000544909 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
PAAF1-215ENST00000544909 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
PAAF1-215ENST00000544909 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
PAAF1-215ENST00000544909 IDI1Q13907 227 aa16.2■□□□□ 0.18
PAAF1-215ENST00000544909 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
PAAF1-215ENST00000544909 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
PAAF1-215ENST00000544909 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
PAAF1-215ENST00000544909 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
PAAF1-215ENST00000544909 DIP2BQ9P265 1576 aa16.18■□□□□ 0.18
PAAF1-215ENST00000544909 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
PAAF1-215ENST00000544909 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
PAAF1-215ENST00000544909 YTHDC2Q9H6S0 1430 aaKnown RBP16.17■□□□□ 0.18
PAAF1-215ENST00000544909 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
PAAF1-215ENST00000544909 C20orf194Q5TEA3 1177 aa16.17■□□□□ 0.18
PAAF1-215ENST00000544909 TMEM132EQ6IEE7 984 aa16.17■□□□□ 0.18
PAAF1-215ENST00000544909 TERF2IPQ9NYB0 399 aa16.15■□□□□ 0.18
PAAF1-215ENST00000544909 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
PAAF1-215ENST00000544909 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
PAAF1-215ENST00000544909 A0A1W2PP64 1363 aa16.14■□□□□ 0.17
PAAF1-215ENST00000544909 MYO5BQ9ULV0 1848 aa16.14■□□□□ 0.17
PAAF1-215ENST00000544909 MTHFSP49914 203 aa16.13■□□□□ 0.17
PAAF1-215ENST00000544909 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
PAAF1-215ENST00000544909 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
PAAF1-215ENST00000544909 CDC42BPGQ6DT37 1551 aa16.13■□□□□ 0.17
PAAF1-215ENST00000544909 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
PAAF1-215ENST00000544909 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
PAAF1-215ENST00000544909 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
PAAF1-215ENST00000544909 ATP7BP35670 1465 aa16.12■□□□□ 0.17
PAAF1-215ENST00000544909 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
PAAF1-215ENST00000544909 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
PAAF1-215ENST00000544909 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
PAAF1-215ENST00000544909 IL16Q14005 1332 aa16.11■□□□□ 0.17
PAAF1-215ENST00000544909 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
PAAF1-215ENST00000544909 PNPLA6Q8IY17 1366 aa16.1■□□□□ 0.17
PAAF1-215ENST00000544909 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
PAAF1-215ENST00000544909 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
PAAF1-215ENST00000544909 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.17
PAAF1-215ENST00000544909 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.17
PAAF1-215ENST00000544909 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.17
PAAF1-215ENST00000544909 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
PAAF1-215ENST00000544909 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
PAAF1-215ENST00000544909 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
PAAF1-215ENST00000544909 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
PAAF1-215ENST00000544909 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
PAAF1-215ENST00000544909 BCAR3O75815 825 aa16.06■□□□□ 0.16
PAAF1-215ENST00000544909 SRPK2P78362 688 aaKnown RBP16.06■□□□□ 0.16
PAAF1-215ENST00000544909 PMFBP1Q8TBY8 1022 aa16.06■□□□□ 0.16
PAAF1-215ENST00000544909 CABP2Q9NPB3 220 aa16.06■□□□□ 0.16
PAAF1-215ENST00000544909 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
PAAF1-215ENST00000544909 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
PAAF1-215ENST00000544909 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
PAAF1-215ENST00000544909 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
PAAF1-215ENST00000544909 KNDC1Q76NI1 1749 aa16.04■□□□□ 0.16
PAAF1-215ENST00000544909 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
PAAF1-215ENST00000544909 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
PAAF1-215ENST00000544909 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
PAAF1-215ENST00000544909 POGKQ9P215 609 aa16.04■□□□□ 0.16
PAAF1-215ENST00000544909 TECPR2O15040 1411 aa16.03■□□□□ 0.16
PAAF1-215ENST00000544909 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
PAAF1-215ENST00000544909 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
PAAF1-215ENST00000544909 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.03■□□□□ 0.16
PAAF1-215ENST00000544909 FAM135BQ49AJ0 1406 aa16.03■□□□□ 0.16
PAAF1-215ENST00000544909 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PAAF1-215ENST00000544909 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PAAF1-215ENST00000544909 ZNF428Q96B54 188 aa16.03■□□□□ 0.16
PAAF1-215ENST00000544909 PLEKHF1Q96S99 279 aa16.03■□□□□ 0.16
PAAF1-215ENST00000544909 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.16
PAAF1-215ENST00000544909 FYB1O15117 783 aa16.02■□□□□ 0.16
PAAF1-215ENST00000544909 PPIP5K1Q6PFW1 1433 aa16.01■□□□□ 0.15
PAAF1-215ENST00000544909 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
PAAF1-215ENST00000544909 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
PAAF1-215ENST00000544909 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms