RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 DHX57Q6P158 1386 aaKnown RBP8.1□□□□□ -1.11
CLSTN3-215ENST00000544584 BRWD3Q6RI45 1802 aa8.1□□□□□ -1.11
CLSTN3-215ENST00000544584 NEXMIFQ5QGS0 1516 aa8.1□□□□□ -1.11
CLSTN3-215ENST00000544584 METP08581 1390 aa8.1□□□□□ -1.11
CLSTN3-215ENST00000544584 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 MARF1Q9Y4F3 1742 aaKnown RBP8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 DCAF11Q8TEB1 546 aa8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 LRRC59Q96AG4 307 aaKnown RBP8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 PTCH1Q13635 1447 aa8.09□□□□□ -1.11
CLSTN3-215ENST00000544584 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
CLSTN3-215ENST00000544584 USP21Q9UK80 565 aa8.08□□□□□ -1.12
CLSTN3-215ENST00000544584 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
CLSTN3-215ENST00000544584 LRPPRCP42704 1394 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-215ENST00000544584 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 ADGRL3Q9HAR2 1447 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 DEFB132Q7Z7B7 95 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 C14orf93Q9H972 538 aaKnown RBP8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 POGKQ9P215 609 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 STK26Q9P289 416 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 KDM2AQ9Y2K7 1162 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 ABCC11Q96J66 1382 aa8.07□□□□□ -1.12
CLSTN3-215ENST00000544584 ADGRF5Q8IZF2 1346 aa8.06□□□□□ -1.12
CLSTN3-215ENST00000544584 MST1RQ04912 1400 aa8.06□□□□□ -1.12
CLSTN3-215ENST00000544584 MYOM2P54296 1465 aa8.06□□□□□ -1.12
CLSTN3-215ENST00000544584 GLI3P10071 1580 aa8.05□□□□□ -1.12
CLSTN3-215ENST00000544584 PIK3C2GO75747 1445 aa8.05□□□□□ -1.12
CLSTN3-215ENST00000544584 PTPRUQ92729 1446 aa8.05□□□□□ -1.12
CLSTN3-215ENST00000544584 EIF3AQ14152 1382 aaKnown RBP8.05□□□□□ -1.12
CLSTN3-215ENST00000544584 PPLO60437 1756 aa8.05□□□□□ -1.12
CLSTN3-215ENST00000544584 PRAG1Q86YV5 1406 aa8.04□□□□□ -1.12
CLSTN3-215ENST00000544584 PSDA5PKW4 1024 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-215ENST00000544584 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
CLSTN3-215ENST00000544584 PSME1Q06323 249 aa8.04□□□□□ -1.12
CLSTN3-215ENST00000544584 NPHP3Q7Z494 1330 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 TECPR2O15040 1411 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 SENP3-EIF4A1A0A087X0R7 540 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 CFAP70Q5T0N1 1121 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 XRN1Q8IZH2 1706 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 NRXN3Q9Y4C0 1643 aa8.03□□□□□ -1.12
CLSTN3-215ENST00000544584 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
CLSTN3-215ENST00000544584 SF3B2Q13435 895 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-215ENST00000544584 TMEM132EQ6IEE7 984 aa8.02□□□□□ -1.13
CLSTN3-215ENST00000544584 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-215ENST00000544584 CHD4Q14839 1912 aa8.01□□□□□ -1.13
CLSTN3-215ENST00000544584 NRXN1Q9ULB1 1477 aa8.01□□□□□ -1.13
CLSTN3-215ENST00000544584 RGPD1P0DJD0 1748 aa8.01□□□□□ -1.13
CLSTN3-215ENST00000544584 SLC24A1O60721 1099 aa8.01□□□□□ -1.13
CLSTN3-215ENST00000544584 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
CLSTN3-215ENST00000544584 C1orf167Q5SNV9 1468 aa8□□□□□ -1.13
CLSTN3-215ENST00000544584 RALGAPBQ86X10 1494 aa8□□□□□ -1.13
CLSTN3-215ENST00000544584 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
CLSTN3-215ENST00000544584 TRAK1Q9UPV9 953 aa8□□□□□ -1.13
CLSTN3-215ENST00000544584 NALCNQ8IZF0 1738 aa8□□□□□ -1.13
CLSTN3-215ENST00000544584 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
CLSTN3-215ENST00000544584 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-215ENST00000544584 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
CLSTN3-215ENST00000544584 DDX17Q92841 729 aaKnown RBP7.99□□□□□ -1.13
CLSTN3-215ENST00000544584 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 TNS1Q9HBL0 1735 aaKnown RBP7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 DISP2A7MBM2 1401 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 BAG6P46379 1132 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 C1QTNF8P60827 252 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 SAFB2Q14151 953 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 ZNF784Q8NCA9 323 aaPredicted RBP7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 SLIT2O94813 1529 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 DLC1Q96QB1 1528 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 IFT172Q9UG01 1749 aa7.98□□□□□ -1.13
CLSTN3-215ENST00000544584 GPRASP1Q5JY77 1395 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 CDC42BPGQ6DT37 1551 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 ORAI2Q96SN7 254 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 PHF8Q9UPP1 1060 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 NINLQ9Y2I6 1382 aa7.97□□□□□ -1.13
CLSTN3-215ENST00000544584 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
CLSTN3-215ENST00000544584 FOXO3O43524 673 aa7.96□□□□□ -1.14
CLSTN3-215ENST00000544584 NGDNQ8NEJ9 315 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-215ENST00000544584 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.14
CLSTN3-215ENST00000544584 ARHGEF10O15013 1369 aa7.96□□□□□ -1.14
CLSTN3-215ENST00000544584 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 KRT28Q7Z3Y7 464 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 MINK1Q8N4C8 1332 aaPredicted RBP7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 CLSPNQ9HAW4 1339 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 RREB1Q92766 1687 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 NWD2Q9ULI1 1742 aa7.95□□□□□ -1.14
CLSTN3-215ENST00000544584 UTRNP46939 3433 aa7.94□□□□□ -1.14
CLSTN3-215ENST00000544584 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
CLSTN3-215ENST00000544584 SRPK2P78362 688 aaKnown RBP7.94□□□□□ -1.14
CLSTN3-215ENST00000544584 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
CLSTN3-215ENST00000544584 EVC2Q86UK5 1308 aa7.94□□□□□ -1.14
CLSTN3-215ENST00000544584 CENPJQ9HC77 1338 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms