RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 MED14O60244 1454 aa13.38□□□□□ -0.27
SP140-214ENST00000544128 METP08581 1390 aa13.38□□□□□ -0.27
SP140-214ENST00000544128 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
SP140-214ENST00000544128 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
SP140-214ENST00000544128 STK26Q9P289 416 aa13.38□□□□□ -0.27
SP140-214ENST00000544128 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
SP140-214ENST00000544128 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
SP140-214ENST00000544128 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
SP140-214ENST00000544128 USP47Q96K76 1375 aa13.36□□□□□ -0.27
SP140-214ENST00000544128 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
SP140-214ENST00000544128 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
SP140-214ENST00000544128 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
SP140-214ENST00000544128 LRPPRCP42704 1394 aaKnown RBP13.33□□□□□ -0.27
SP140-214ENST00000544128 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.28
SP140-214ENST00000544128 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
SP140-214ENST00000544128 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
SP140-214ENST00000544128 LRRC7Q96NW7 1537 aa13.32□□□□□ -0.28
SP140-214ENST00000544128 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SP140-214ENST00000544128 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
SP140-214ENST00000544128 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
SP140-214ENST00000544128 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
SP140-214ENST00000544128 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
SP140-214ENST00000544128 POGKQ9P215 609 aa13.3□□□□□ -0.28
SP140-214ENST00000544128 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
SP140-214ENST00000544128 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
SP140-214ENST00000544128 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
SP140-214ENST00000544128 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
SP140-214ENST00000544128 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
SP140-214ENST00000544128 CHD2O14647 1828 aaKnown RBP13.29□□□□□ -0.28
SP140-214ENST00000544128 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
SP140-214ENST00000544128 KNDC1Q76NI1 1749 aa13.28□□□□□ -0.28
SP140-214ENST00000544128 KCNA6P17658 529 aa13.28□□□□□ -0.28
SP140-214ENST00000544128 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
SP140-214ENST00000544128 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
SP140-214ENST00000544128 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
SP140-214ENST00000544128 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
SP140-214ENST00000544128 TECPR2O15040 1411 aa13.27□□□□□ -0.29
SP140-214ENST00000544128 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
SP140-214ENST00000544128 TESK2Q96S53 571 aa13.26□□□□□ -0.29
SP140-214ENST00000544128 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
SP140-214ENST00000544128 PLEKHH1Q9ULM0 1364 aa13.26□□□□□ -0.29
SP140-214ENST00000544128 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
SP140-214ENST00000544128 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
SP140-214ENST00000544128 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
SP140-214ENST00000544128 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
SP140-214ENST00000544128 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SP140-214ENST00000544128 C11orf95C9JLR9 678 aaPredicted RBP13.24□□□□□ -0.29
SP140-214ENST00000544128 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
SP140-214ENST00000544128 PTCH1Q13635 1447 aa13.23□□□□□ -0.29
SP140-214ENST00000544128 TMF1P82094 1093 aa13.23□□□□□ -0.29
SP140-214ENST00000544128 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
SP140-214ENST00000544128 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
SP140-214ENST00000544128 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
SP140-214ENST00000544128 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
SP140-214ENST00000544128 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
SP140-214ENST00000544128 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
SP140-214ENST00000544128 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
SP140-214ENST00000544128 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
SP140-214ENST00000544128 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
SP140-214ENST00000544128 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
SP140-214ENST00000544128 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
SP140-214ENST00000544128 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
SP140-214ENST00000544128 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
SP140-214ENST00000544128 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
SP140-214ENST00000544128 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
SP140-214ENST00000544128 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
SP140-214ENST00000544128 SRPK2P78362 688 aaKnown RBP13.17□□□□□ -0.3
SP140-214ENST00000544128 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
SP140-214ENST00000544128 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
SP140-214ENST00000544128 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
SP140-214ENST00000544128 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
SP140-214ENST00000544128 ADGRL3Q9HAR2 1447 aa13.14□□□□□ -0.31
SP140-214ENST00000544128 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
SP140-214ENST00000544128 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
SP140-214ENST00000544128 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
SP140-214ENST00000544128 PROM2Q8N271 834 aa13.13□□□□□ -0.31
SP140-214ENST00000544128 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
SP140-214ENST00000544128 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SP140-214ENST00000544128 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
SP140-214ENST00000544128 PHLPP1O60346 1717 aa13.11□□□□□ -0.31
SP140-214ENST00000544128 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
SP140-214ENST00000544128 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
SP140-214ENST00000544128 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
SP140-214ENST00000544128 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
SP140-214ENST00000544128 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
SP140-214ENST00000544128 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
SP140-214ENST00000544128 MSH6P52701 1360 aa13.09□□□□□ -0.31
SP140-214ENST00000544128 ATF3P18847 181 aa13.09□□□□□ -0.31
SP140-214ENST00000544128 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
SP140-214ENST00000544128 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
SP140-214ENST00000544128 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
SP140-214ENST00000544128 JCADQ9P266 1359 aa13.08□□□□□ -0.31
SP140-214ENST00000544128 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
SP140-214ENST00000544128 MYOM1P52179 1685 aa13.08□□□□□ -0.32
SP140-214ENST00000544128 LRP6O75581 1613 aa13.07□□□□□ -0.32
SP140-214ENST00000544128 RXRBP28702 533 aa13.07□□□□□ -0.32
SP140-214ENST00000544128 PANK3Q9H999 370 aa13.07□□□□□ -0.32
SP140-214ENST00000544128 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
SP140-214ENST00000544128 ATP7BP35670 1465 aa13.07□□□□□ -0.32
SP140-214ENST00000544128 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms