RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 MYOM1P52179 1685 aa15.28■□□□□ 0.04
LDHA-222ENST00000543695 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
LDHA-222ENST00000543695 MSH6P52701 1360 aa15.27■□□□□ 0.04
LDHA-222ENST00000543695 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
LDHA-222ENST00000543695 TMF1P82094 1093 aa15.27■□□□□ 0.04
LDHA-222ENST00000543695 SETBP1Q9Y6X0 1596 aa15.27■□□□□ 0.03
LDHA-222ENST00000543695 NKTRP30414 1462 aaKnown RBP15.27■□□□□ 0.03
LDHA-222ENST00000543695 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
LDHA-222ENST00000543695 SLAIN2Q9P270 581 aa15.26■□□□□ 0.03
LDHA-222ENST00000543695 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
LDHA-222ENST00000543695 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
LDHA-222ENST00000543695 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
LDHA-222ENST00000543695 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
LDHA-222ENST00000543695 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
LDHA-222ENST00000543695 AMOTL2Q9Y2J4 779 aa15.23■□□□□ 0.03
LDHA-222ENST00000543695 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
LDHA-222ENST00000543695 NCOA3Q9Y6Q9 1424 aa15.23■□□□□ 0.03
LDHA-222ENST00000543695 PER1O15534 1290 aaPredicted RBP15.22■□□□□ 0.03
LDHA-222ENST00000543695 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
LDHA-222ENST00000543695 C19orf44Q9H6X5 657 aa15.22■□□□□ 0.03
LDHA-222ENST00000543695 SMG6Q86US8 1419 aaKnown RBP15.22■□□□□ 0.03
LDHA-222ENST00000543695 INSRP06213 1382 aa15.22■□□□□ 0.03
LDHA-222ENST00000543695 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
LDHA-222ENST00000543695 ATF3P18847 181 aa15.21■□□□□ 0.03
LDHA-222ENST00000543695 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
LDHA-222ENST00000543695 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.03
LDHA-222ENST00000543695 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
LDHA-222ENST00000543695 MYO5BQ9ULV0 1848 aa15.2■□□□□ 0.02
LDHA-222ENST00000543695 MED1Q15648 1581 aaPredicted RBP15.19■□□□□ 0.02
LDHA-222ENST00000543695 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
LDHA-222ENST00000543695 XIRP1Q702N8 1843 aaKnown RBP15.19■□□□□ 0.02
LDHA-222ENST00000543695 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
LDHA-222ENST00000543695 QRICH2Q9H0J4 1663 aa15.17■□□□□ 0.02
LDHA-222ENST00000543695 DIP2AQ14689 1571 aa15.17■□□□□ 0.02
LDHA-222ENST00000543695 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
LDHA-222ENST00000543695 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
LDHA-222ENST00000543695 CHD2O14647 1828 aaKnown RBP15.16■□□□□ 0.02
LDHA-222ENST00000543695 PANK3Q9H999 370 aa15.16■□□□□ 0.02
LDHA-222ENST00000543695 ASXL1Q8IXJ9 1541 aa15.15■□□□□ 0.02
LDHA-222ENST00000543695 PIK3C2GO75747 1445 aa15.14■□□□□ 0.01
LDHA-222ENST00000543695 PTPRUQ92729 1446 aa15.14■□□□□ 0.01
LDHA-222ENST00000543695 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
LDHA-222ENST00000543695 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
LDHA-222ENST00000543695 NEXMIFQ5QGS0 1516 aa15.13■□□□□ 0.01
LDHA-222ENST00000543695 ADGRB1O14514 1584 aa15.13■□□□□ 0.01
LDHA-222ENST00000543695 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
LDHA-222ENST00000543695 NUDCQ9Y266 331 aa15.13■□□□□ 0.01
LDHA-222ENST00000543695 METP08581 1390 aa15.12■□□□□ 0.01
LDHA-222ENST00000543695 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
LDHA-222ENST00000543695 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
LDHA-222ENST00000543695 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
LDHA-222ENST00000543695 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
LDHA-222ENST00000543695 JCADQ9P266 1359 aa15.11■□□□□ 0.01
LDHA-222ENST00000543695 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
LDHA-222ENST00000543695 RGS17Q9UGC6 210 aaPredicted RBP15.09■□□□□ 0.01
LDHA-222ENST00000543695 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
LDHA-222ENST00000543695 BRINP3Q76B58 766 aa15.08■□□□□ 0
LDHA-222ENST00000543695 PPP4R2Q9NY27 417 aa15.08■□□□□ 0
LDHA-222ENST00000543695 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
LDHA-222ENST00000543695 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
LDHA-222ENST00000543695 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
LDHA-222ENST00000543695 DCCP43146 1447 aa15.07■□□□□ 0
LDHA-222ENST00000543695 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
LDHA-222ENST00000543695 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
LDHA-222ENST00000543695 PDE3BQ13370 1112 aa15.05■□□□□ -0
LDHA-222ENST00000543695 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ -0
LDHA-222ENST00000543695 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.04■□□□□ -0
LDHA-222ENST00000543695 SPATA31A6Q5VVP1 1343 aa15.04■□□□□ -0
LDHA-222ENST00000543695 CENPJQ9HC77 1338 aaPredicted RBP15.04■□□□□ -0
LDHA-222ENST00000543695 POTEAQ6S8J7 498 aa15.03■□□□□ -0
LDHA-222ENST00000543695 ADGRL3Q9HAR2 1447 aa15.02■□□□□ -0
LDHA-222ENST00000543695 IRX6P78412 446 aaPredicted RBP15.02■□□□□ -0
LDHA-222ENST00000543695 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
LDHA-222ENST00000543695 LRRC59Q96AG4 307 aaKnown RBP15.02■□□□□ -0
LDHA-222ENST00000543695 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
LDHA-222ENST00000543695 XRN1Q8IZH2 1706 aaKnown RBP15.01□□□□□ -0.01
LDHA-222ENST00000543695 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
LDHA-222ENST00000543695 MST1RQ04912 1400 aa15□□□□□ -0.01
LDHA-222ENST00000543695 ROBO2Q9HCK4 1378 aa15□□□□□ -0.01
LDHA-222ENST00000543695 PUS7Q96PZ0 661 aaKnown RBP15□□□□□ -0.01
LDHA-222ENST00000543695 PTCH1Q13635 1447 aa15□□□□□ -0.01
LDHA-222ENST00000543695 ADRA2BP18089 450 aa14.99□□□□□ -0.01
LDHA-222ENST00000543695 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 ZNF772Q68DY9 489 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 STK26Q9P289 416 aa14.98□□□□□ -0.01
LDHA-222ENST00000543695 COL16A1Q07092 1604 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
LDHA-222ENST00000543695 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
LDHA-222ENST00000543695 DDX17Q92841 729 aaKnown RBP14.96□□□□□ -0.01
LDHA-222ENST00000543695 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
LDHA-222ENST00000543695 ANKRD26Q9UPS8 1709 aa14.96□□□□□ -0.01
LDHA-222ENST00000543695 TMEM132EQ6IEE7 984 aa14.95□□□□□ -0.02
LDHA-222ENST00000543695 C1orf167Q5SNV9 1468 aa14.95□□□□□ -0.02
LDHA-222ENST00000543695 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
LDHA-222ENST00000543695 SHPRHQ149N8 1683 aa14.94□□□□□ -0.02
LDHA-222ENST00000543695 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
LDHA-222ENST00000543695 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
LDHA-222ENST00000543695 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.025e-7■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms