RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CABP2Q9NPB3 220 aa20.61■□□□□ 0.89
CLPTM1-202ENST00000541297 PRKCSHP14314 528 aaPredicted RBP20.61■□□□□ 0.89
CLPTM1-202ENST00000541297 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
CLPTM1-202ENST00000541297 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
CLPTM1-202ENST00000541297 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
CLPTM1-202ENST00000541297 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
CLPTM1-202ENST00000541297 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
CLPTM1-202ENST00000541297 EID1Q9Y6B2 187 aa20.59■□□□□ 0.89
CLPTM1-202ENST00000541297 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
CLPTM1-202ENST00000541297 SRPK2P78362 688 aaKnown RBP20.58■□□□□ 0.88
CLPTM1-202ENST00000541297 AMER1Q5JTC6 1135 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-202ENST00000541297 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-202ENST00000541297 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
CLPTM1-202ENST00000541297 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-202ENST00000541297 SLIT1O75093 1534 aa20.56■□□□□ 0.88
CLPTM1-202ENST00000541297 SLC26A8Q96RN1 970 aa20.56■□□□□ 0.88
CLPTM1-202ENST00000541297 PLEKHG1Q9ULL1 1385 aa20.56■□□□□ 0.88
CLPTM1-202ENST00000541297 ADAMTS13Q76LX8 1427 aa20.56■□□□□ 0.88
CLPTM1-202ENST00000541297 DLC1Q96QB1 1528 aa20.55■□□□□ 0.88
CLPTM1-202ENST00000541297 ABCC11Q96J66 1382 aa20.55■□□□□ 0.88
CLPTM1-202ENST00000541297 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
CLPTM1-202ENST00000541297 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
CLPTM1-202ENST00000541297 BRD4O60885 1362 aaPredicted RBP20.53■□□□□ 0.88
CLPTM1-202ENST00000541297 KNDC1Q76NI1 1749 aa20.51■□□□□ 0.87
CLPTM1-202ENST00000541297 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
CLPTM1-202ENST00000541297 CDK19Q9BWU1 502 aa20.51■□□□□ 0.87
CLPTM1-202ENST00000541297 NSD3Q9BZ95 1437 aa20.51■□□□□ 0.87
CLPTM1-202ENST00000541297 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
CLPTM1-202ENST00000541297 SETD1BQ9UPS6 1966 aaKnown RBP20.49■□□□□ 0.87
CLPTM1-202ENST00000541297 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
CLPTM1-202ENST00000541297 SENP3-EIF4A1A0A087X0R7 540 aa20.48■□□□□ 0.87
CLPTM1-202ENST00000541297 CPS1P31327 1500 aa20.47■□□□□ 0.87
CLPTM1-202ENST00000541297 ZNF142P52746 1687 aaPredicted RBP20.47■□□□□ 0.87
CLPTM1-202ENST00000541297 ROBO2Q9HCK4 1378 aa20.47■□□□□ 0.87
CLPTM1-202ENST00000541297 MED14O60244 1454 aa20.47■□□□□ 0.87
CLPTM1-202ENST00000541297 TECPR2O15040 1411 aa20.46■□□□□ 0.87
CLPTM1-202ENST00000541297 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
CLPTM1-202ENST00000541297 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
CLPTM1-202ENST00000541297 ATAD2Q6PL18 1390 aa20.45■□□□□ 0.86
CLPTM1-202ENST00000541297 ANKRD36BQ8N2N9 1353 aa20.45■□□□□ 0.86
CLPTM1-202ENST00000541297 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
CLPTM1-202ENST00000541297 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
CLPTM1-202ENST00000541297 A0A1W2PP64 1363 aa20.43■□□□□ 0.86
CLPTM1-202ENST00000541297 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
CLPTM1-202ENST00000541297 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
CLPTM1-202ENST00000541297 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
CLPTM1-202ENST00000541297 WASLO00401 505 aaPredicted RBP20.41■□□□□ 0.86
CLPTM1-202ENST00000541297 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 ERICH6Q7L0X2 663 aa20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
CLPTM1-202ENST00000541297 CD163L1Q9NR16 1453 aa20.39■□□□□ 0.86
CLPTM1-202ENST00000541297 USP32Q8NFA0 1604 aa20.39■□□□□ 0.85
CLPTM1-202ENST00000541297 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.85
CLPTM1-202ENST00000541297 DIP2AQ14689 1571 aa20.39■□□□□ 0.85
CLPTM1-202ENST00000541297 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
CLPTM1-202ENST00000541297 ERICH6BQ5W0A0 696 aa20.38■□□□□ 0.85
CLPTM1-202ENST00000541297 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
CLPTM1-202ENST00000541297 NCKAP5LQ9HCH0 1330 aa20.37■□□□□ 0.85
CLPTM1-202ENST00000541297 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
CLPTM1-202ENST00000541297 NUTM2FA1L443 756 aa20.35■□□□□ 0.85
CLPTM1-202ENST00000541297 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1-202ENST00000541297 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
CLPTM1-202ENST00000541297 PPIP5K1Q6PFW1 1433 aa20.34■□□□□ 0.85
CLPTM1-202ENST00000541297 GGNBP2Q9H3C7 697 aa20.33■□□□□ 0.84
CLPTM1-202ENST00000541297 XRN1Q8IZH2 1706 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-202ENST00000541297 KCNA6P17658 529 aa20.32■□□□□ 0.84
CLPTM1-202ENST00000541297 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
CLPTM1-202ENST00000541297 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
CLPTM1-202ENST00000541297 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
CLPTM1-202ENST00000541297 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
CLPTM1-202ENST00000541297 PRR36Q9H6K5 1346 aa20.31■□□□□ 0.84
CLPTM1-202ENST00000541297 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
CLPTM1-202ENST00000541297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLPTM1-202ENST00000541297 ATP7BP35670 1465 aa20.3■□□□□ 0.84
CLPTM1-202ENST00000541297 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLPTM1-202ENST00000541297 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
CLPTM1-202ENST00000541297 NSD2O96028 1365 aa20.29■□□□□ 0.84
CLPTM1-202ENST00000541297 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
CLPTM1-202ENST00000541297 KIF20BQ96Q89 1820 aa20.29■□□□□ 0.84
CLPTM1-202ENST00000541297 FYB1O15117 783 aa20.28■□□□□ 0.84
CLPTM1-202ENST00000541297 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.84
CLPTM1-202ENST00000541297 ITSN1Q15811 1721 aa20.26■□□□□ 0.83
CLPTM1-202ENST00000541297 RBM33Q96EV2 1170 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-202ENST00000541297 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-202ENST00000541297 PIK3R4Q99570 1358 aa20.26■□□□□ 0.83
CLPTM1-202ENST00000541297 RGPD8O14715 1765 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-202ENST00000541297 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
CLPTM1-202ENST00000541297 MTHFSP49914 203 aa20.25■□□□□ 0.83
CLPTM1-202ENST00000541297 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-202ENST00000541297 CPSF1Q10570 1443 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-202ENST00000541297 AKAP12Q02952 1782 aa20.24■□□□□ 0.83
CLPTM1-202ENST00000541297 TOPAZ1Q8N9V7 1692 aa20.23■□□□□ 0.83
CLPTM1-202ENST00000541297 MON2Q7Z3U7 1717 aa20.23■□□□□ 0.83
CLPTM1-202ENST00000541297 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1-202ENST00000541297 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
CLPTM1-202ENST00000541297 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms