RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 PIP4K2BP78356 416 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
RTL9-203ENST00000540313 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
RTL9-203ENST00000540313 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 NUCB2P80303 420 aa8.01□□□□□ -1.13
RTL9-203ENST00000540313 HFM1A2PYH4 1435 aa8□□□□□ -1.13
RTL9-203ENST00000540313 EPRSP07814 1512 aaKnown RBP8□□□□□ -1.13
RTL9-203ENST00000540313 DENND4BO75064 1496 aaPredicted RBP8□□□□□ -1.13
RTL9-203ENST00000540313 GOLGA6L19H0YKK7 550 aa8□□□□□ -1.13
RTL9-203ENST00000540313 ELL2O00472 640 aaPredicted RBP8□□□□□ -1.13
RTL9-203ENST00000540313 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
RTL9-203ENST00000540313 ZNF771Q7L3S4 317 aaPredicted RBP8□□□□□ -1.13
RTL9-203ENST00000540313 NCOA2Q15596 1464 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 RUNDC1Q96C34 613 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 ZNF692Q9BU19 519 aaPredicted RBP7.99□□□□□ -1.13
RTL9-203ENST00000540313 H3BQV1 296 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 TOM1O60784 492 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 IFFO2Q5TF58 517 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 MCTP1Q6DN14 999 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 SF3A1Q15459 793 aaKnown RBP7.99□□□□□ -1.13
RTL9-203ENST00000540313 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
RTL9-203ENST00000540313 NLRP2Q9NX02 1062 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 TRAK2O60296 914 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 PANK1Q8TE04 598 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 BACH2Q9BYV9 841 aa7.99□□□□□ -1.13
RTL9-203ENST00000540313 BECN2A8MW95 431 aa7.98□□□□□ -1.13
RTL9-203ENST00000540313 AFAP1Q8N556 730 aa7.98□□□□□ -1.13
RTL9-203ENST00000540313 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 NUTM2BA6NNL0 878 aaPredicted RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 NUTM2EB1AL46 878 aaPredicted RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 NUTM2AQ8IVF1 878 aaPredicted RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 NOC3LQ8WTT2 800 aaKnown RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 TPM2P07951 284 aa7.98□□□□□ -1.13
RTL9-203ENST00000540313 INTS3Q68E01 1043 aaKnown RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
RTL9-203ENST00000540313 API5Q9BZZ5 524 aaKnown RBP7.98□□□□□ -1.13
RTL9-203ENST00000540313 WDR97A6NE52 1622 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 TPM3P06753 285 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 ZNF592Q92610 1267 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 CCDC39Q9UFE4 941 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 TATP17735 454 aaPredicted RBP7.97□□□□□ -1.13
RTL9-203ENST00000540313 PLEKHO1Q53GL0 409 aaPredicted RBP7.97□□□□□ -1.13
RTL9-203ENST00000540313 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
RTL9-203ENST00000540313 KIF14Q15058 1648 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 CLSTN1O94985 981 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 MAP7D2Q96T17 732 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 ADAMTS8Q9UP79 889 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 ADGRL1O94910 1474 aa7.97□□□□□ -1.13
RTL9-203ENST00000540313 MTERF4Q7Z6M4 381 aaKnown RBP7.96□□□□□ -1.13
RTL9-203ENST00000540313 DAPK1P53355 1430 aa7.96□□□□□ -1.13
RTL9-203ENST00000540313 C9orf84Q5VXU9 1444 aa7.96□□□□□ -1.13
RTL9-203ENST00000540313 RIPK4P57078 832 aa7.96□□□□□ -1.13
RTL9-203ENST00000540313 DIAPH3Q9NSV4 1193 aa7.96□□□□□ -1.13
RTL9-203ENST00000540313 DIAPH1O60610 1272 aaKnown RBP7.96□□□□□ -1.14
RTL9-203ENST00000540313 NLRP6P59044 892 aa7.96□□□□□ -1.14
RTL9-203ENST00000540313 CDC45O75419 566 aa7.96□□□□□ -1.14
RTL9-203ENST00000540313 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
RTL9-203ENST00000540313 SPG7Q9UQ90 795 aa7.96□□□□□ -1.14
RTL9-203ENST00000540313 ARAP1Q96P48 1450 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 RUFY2Q8WXA3 655 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 GPS2Q13227 327 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 EIF4G3O43432 1585 aaKnown RBP7.95□□□□□ -1.14
RTL9-203ENST00000540313 A0A0U1RQG5 324 aaPredicted RBP7.95□□□□□ -1.14
RTL9-203ENST00000540313 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 ANKRD30BQ9BXX2 1392 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
RTL9-203ENST00000540313 ZKSCAN1P17029 563 aaPredicted RBP7.94□□□□□ -1.14
RTL9-203ENST00000540313 CCDC173Q0VFZ6 552 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 KIF6Q6ZMV9 814 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 CREBRFQ8IUR6 639 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 ANO2Q9NQ90 1003 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 CCAR2Q8N163 923 aaKnown RBP7.94□□□□□ -1.14
RTL9-203ENST00000540313 PODXL2Q9NZ53 605 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 PDZRN3Q9UPQ7 1066 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 KCNH5Q8NCM2 988 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 RASSF8Q8NHQ8 419 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 GAS2L2Q8NHY3 880 aa7.94□□□□□ -1.14
RTL9-203ENST00000540313 TEX35Q5T0J7 233 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 SETQ01105 290 aaPredicted RBP7.93□□□□□ -1.14
RTL9-203ENST00000540313 PNISRQ8TF01 805 aaKnown RBP7.93□□□□□ -1.14
RTL9-203ENST00000540313 SMC3Q9UQE7 1217 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 TOM1L2Q6ZVM7 507 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 BICD2Q8TD16 824 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 ZNF644Q9H582 1327 aaPredicted RBP7.93□□□□□ -1.14
RTL9-203ENST00000540313 FANCAO15360 1455 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 TARBP1Q13395 1621 aaKnown RBP7.93□□□□□ -1.14
RTL9-203ENST00000540313 PPP2R1AP30153 589 aa7.93□□□□□ -1.14
RTL9-203ENST00000540313 CAVIN1Q6NZI2 390 aaKnown RBP7.92□□□□□ -1.14
RTL9-203ENST00000540313 GNAI1P63096 354 aa7.92□□□□□ -1.14
RTL9-203ENST00000540313 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
RTL9-203ENST00000540313 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
RTL9-203ENST00000540313 IFT57Q9NWB7 429 aa7.92□□□□□ -1.14
RTL9-203ENST00000540313 TPD52L1Q16890 204 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms