RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
CACNB1-206ENST00000539338 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 FAM184AQ8NB25 1140 aa17.79■□□□□ 0.44
CACNB1-206ENST00000539338 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
CACNB1-206ENST00000539338 RASSF8Q8NHQ8 419 aa17.78■□□□□ 0.44
CACNB1-206ENST00000539338 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
CACNB1-206ENST00000539338 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
CACNB1-206ENST00000539338 CCDC34Q96HJ3 373 aa17.78■□□□□ 0.44
CACNB1-206ENST00000539338 GNAI1P63096 354 aa17.77■□□□□ 0.44
CACNB1-206ENST00000539338 CCDC184Q52MB2 194 aa17.77■□□□□ 0.44
CACNB1-206ENST00000539338 ATP6V1DQ9Y5K8 247 aa17.77■□□□□ 0.44
CACNB1-206ENST00000539338 DENND4BO75064 1496 aaPredicted RBP17.77■□□□□ 0.44
CACNB1-206ENST00000539338 PRDM11Q9NQV5 511 aa17.77■□□□□ 0.44
CACNB1-206ENST00000539338 LRPPRCP42704 1394 aaKnown RBP17.76■□□□□ 0.43
CACNB1-206ENST00000539338 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
CACNB1-206ENST00000539338 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
CACNB1-206ENST00000539338 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 TSPYL4Q9UJ04 414 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 NBPF14Q5TI25 921 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 MCTP1Q6DN14 999 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
CACNB1-206ENST00000539338 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
CACNB1-206ENST00000539338 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
CACNB1-206ENST00000539338 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
CACNB1-206ENST00000539338 ROCK1Q13464 1354 aa17.73■□□□□ 0.43
CACNB1-206ENST00000539338 INTS3Q68E01 1043 aaKnown RBP17.73■□□□□ 0.43
CACNB1-206ENST00000539338 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
CACNB1-206ENST00000539338 LMTK3Q96Q04 1460 aa17.73■□□□□ 0.43
CACNB1-206ENST00000539338 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
CACNB1-206ENST00000539338 MSH6P52701 1360 aa17.72■□□□□ 0.43
CACNB1-206ENST00000539338 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
CACNB1-206ENST00000539338 GOLGA6L19H0YKK7 550 aa17.71■□□□□ 0.43
CACNB1-206ENST00000539338 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
CACNB1-206ENST00000539338 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
CACNB1-206ENST00000539338 BECN2A8MW95 431 aa17.71■□□□□ 0.43
CACNB1-206ENST00000539338 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
CACNB1-206ENST00000539338 BCAR3O75815 825 aa17.7■□□□□ 0.42
CACNB1-206ENST00000539338 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
CACNB1-206ENST00000539338 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
CACNB1-206ENST00000539338 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
CACNB1-206ENST00000539338 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
CACNB1-206ENST00000539338 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
CACNB1-206ENST00000539338 NOL10Q9BSC4 688 aaKnown RBP17.69■□□□□ 0.42
CACNB1-206ENST00000539338 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
CACNB1-206ENST00000539338 AAMPQ13685 434 aa17.68■□□□□ 0.42
CACNB1-206ENST00000539338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
CACNB1-206ENST00000539338 PDZRN3Q9UPQ7 1066 aa17.68■□□□□ 0.42
CACNB1-206ENST00000539338 NLRP6P59044 892 aa17.68■□□□□ 0.42
CACNB1-206ENST00000539338 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
CACNB1-206ENST00000539338 RBM33Q96EV2 1170 aaKnown RBP17.68■□□□□ 0.42
CACNB1-206ENST00000539338 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
CACNB1-206ENST00000539338 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
CACNB1-206ENST00000539338 ABTB2Q8N961 1025 aa17.67■□□□□ 0.42
CACNB1-206ENST00000539338 CDC45O75419 566 aa17.67■□□□□ 0.42
CACNB1-206ENST00000539338 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNB1-206ENST00000539338 NOC3LQ8WTT2 800 aaKnown RBP17.67■□□□□ 0.42
CACNB1-206ENST00000539338 SLC26A8Q96RN1 970 aa17.67■□□□□ 0.42
CACNB1-206ENST00000539338 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
CACNB1-206ENST00000539338 EHBP1L1Q8N3D4 1523 aa17.66■□□□□ 0.42
CACNB1-206ENST00000539338 NUCB2P80303 420 aa17.66■□□□□ 0.42
CACNB1-206ENST00000539338 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
CACNB1-206ENST00000539338 C9orf84Q5VXU9 1444 aa17.66■□□□□ 0.42
CACNB1-206ENST00000539338 PES1O00541 588 aaKnown RBP17.66■□□□□ 0.42
CACNB1-206ENST00000539338 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
CACNB1-206ENST00000539338 C1orf115Q9H7X2 142 aa17.65■□□□□ 0.42
CACNB1-206ENST00000539338 DDX58O95786 925 aaKnown RBP17.65■□□□□ 0.42
CACNB1-206ENST00000539338 SMC3Q9UQE7 1217 aa17.65■□□□□ 0.42
CACNB1-206ENST00000539338 BICD2Q8TD16 824 aa17.64■□□□□ 0.41
CACNB1-206ENST00000539338 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
CACNB1-206ENST00000539338 C16orf71Q8IYS4 520 aaPredicted RBP17.64■□□□□ 0.41
CACNB1-206ENST00000539338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.41
CACNB1-206ENST00000539338 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CACNB1-206ENST00000539338 TPM3P06753 285 aa17.63■□□□□ 0.41
CACNB1-206ENST00000539338 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
CACNB1-206ENST00000539338 TPD52L1Q16890 204 aaPredicted RBP17.62■□□□□ 0.41
CACNB1-206ENST00000539338 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CACNB1-206ENST00000539338 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
CACNB1-206ENST00000539338 APPP05067 770 aa17.62■□□□□ 0.41
CACNB1-206ENST00000539338 AIMP1Q12904 312 aaKnown RBP17.62■□□□□ 0.41
CACNB1-206ENST00000539338 FOSBP53539 338 aa17.62■□□□□ 0.41
CACNB1-206ENST00000539338 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
CACNB1-206ENST00000539338 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
CACNB1-206ENST00000539338 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
CACNB1-206ENST00000539338 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
CACNB1-206ENST00000539338 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
CACNB1-206ENST00000539338 NOB1Q9ULX3 412 aaKnown RBP17.61■□□□□ 0.41
CACNB1-206ENST00000539338 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 SYNE3Q6ZMZ3 975 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 CPLX1O14810 134 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 MARCH6O60337 910 aa17.61■□□□□ 0.41
CACNB1-206ENST00000539338 CCAR2Q8N163 923 aaKnown RBP17.6■□□□□ 0.41
CACNB1-206ENST00000539338 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
CACNB1-206ENST00000539338 FANCAO15360 1455 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms