RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
PHC1-206ENST00000539063 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
PHC1-206ENST00000539063 TECPR2O15040 1411 aa13.1□□□□□ -0.31
PHC1-206ENST00000539063 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
PHC1-206ENST00000539063 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
PHC1-206ENST00000539063 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
PHC1-206ENST00000539063 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
PHC1-206ENST00000539063 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
PHC1-206ENST00000539063 CPS1P31327 1500 aa13.08□□□□□ -0.32
PHC1-206ENST00000539063 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
PHC1-206ENST00000539063 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
PHC1-206ENST00000539063 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
PHC1-206ENST00000539063 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
PHC1-206ENST00000539063 MED14O60244 1454 aa13.07□□□□□ -0.32
PHC1-206ENST00000539063 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
PHC1-206ENST00000539063 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
PHC1-206ENST00000539063 HDGFL2Q7Z4V5 671 aaPredicted RBP13.06□□□□□ -0.32
PHC1-206ENST00000539063 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
PHC1-206ENST00000539063 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
PHC1-206ENST00000539063 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
PHC1-206ENST00000539063 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
PHC1-206ENST00000539063 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
PHC1-206ENST00000539063 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
PHC1-206ENST00000539063 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
PHC1-206ENST00000539063 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
PHC1-206ENST00000539063 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
PHC1-206ENST00000539063 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
PHC1-206ENST00000539063 PARD3Q8TEW0 1356 aa13.03□□□□□ -0.32
PHC1-206ENST00000539063 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
PHC1-206ENST00000539063 MYOM1P52179 1685 aa13.02□□□□□ -0.32
PHC1-206ENST00000539063 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
PHC1-206ENST00000539063 BRD4O60885 1362 aaPredicted RBP13.02□□□□□ -0.33
PHC1-206ENST00000539063 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.33
PHC1-206ENST00000539063 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
PHC1-206ENST00000539063 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
PHC1-206ENST00000539063 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
PHC1-206ENST00000539063 NSD2O96028 1365 aa12.99□□□□□ -0.33
PHC1-206ENST00000539063 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
PHC1-206ENST00000539063 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
PHC1-206ENST00000539063 KCNA6P17658 529 aa12.98□□□□□ -0.33
PHC1-206ENST00000539063 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
PHC1-206ENST00000539063 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
PHC1-206ENST00000539063 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
PHC1-206ENST00000539063 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
PHC1-206ENST00000539063 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
PHC1-206ENST00000539063 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
PHC1-206ENST00000539063 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
PHC1-206ENST00000539063 ATP7BP35670 1465 aa12.97□□□□□ -0.33
PHC1-206ENST00000539063 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
PHC1-206ENST00000539063 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.33
PHC1-206ENST00000539063 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
PHC1-206ENST00000539063 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
PHC1-206ENST00000539063 HNRNPUQ00839 825 aaKnown RBP eCLIP12.94□□□□□ -0.34
PHC1-206ENST00000539063 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
PHC1-206ENST00000539063 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
PHC1-206ENST00000539063 USP32Q8NFA0 1604 aa12.94□□□□□ -0.34
PHC1-206ENST00000539063 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHC1-206ENST00000539063 HSPA2P54652 639 aa12.92□□□□□ -0.34
PHC1-206ENST00000539063 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
PHC1-206ENST00000539063 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
PHC1-206ENST00000539063 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
PHC1-206ENST00000539063 ANKARQ7Z5J8 1434 aa12.91□□□□□ -0.34
PHC1-206ENST00000539063 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
PHC1-206ENST00000539063 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
PHC1-206ENST00000539063 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
PHC1-206ENST00000539063 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
PHC1-206ENST00000539063 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
PHC1-206ENST00000539063 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
PHC1-206ENST00000539063 PRR36Q9H6K5 1346 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
PHC1-206ENST00000539063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
PHC1-206ENST00000539063 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
PHC1-206ENST00000539063 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 NWD1Q149M9 1564 aa12.89□□□□□ -0.35
PHC1-206ENST00000539063 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
PHC1-206ENST00000539063 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
PHC1-206ENST00000539063 ACEP12821 1306 aa12.87□□□□□ -0.35
PHC1-206ENST00000539063 COG3Q96JB2 828 aa12.86□□□□□ -0.35
PHC1-206ENST00000539063 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
PHC1-206ENST00000539063 ITSN1Q15811 1721 aa12.85□□□□□ -0.35
PHC1-206ENST00000539063 INSRP06213 1382 aa12.85□□□□□ -0.35
PHC1-206ENST00000539063 FYB1O15117 783 aa12.85□□□□□ -0.35
PHC1-206ENST00000539063 ATF3P18847 181 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 TTC21BQ7Z4L5 1316 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
PHC1-206ENST00000539063 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
PHC1-206ENST00000539063 POLR3AO14802 1390 aaPredicted RBP12.83□□□□□ -0.36
PHC1-206ENST00000539063 USP6P35125 1406 aa12.83□□□□□ -0.36
PHC1-206ENST00000539063 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
PHC1-206ENST00000539063 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
PHC1-206ENST00000539063 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
PHC1-206ENST00000539063 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
PHC1-206ENST00000539063 MTHFSP49914 203 aa12.82□□□□□ -0.36
PHC1-206ENST00000539063 NME9Q86XW9 330 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms