RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 URB2Q14146 1524 aaKnown RBP8.53□□□□□ -1.04
KNTC1-210ENST00000539013 CFAP43Q8NDM7 1665 aa8.53□□□□□ -1.04
KNTC1-210ENST00000539013 LRRC9Q6ZRR7 1453 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 FYCO1Q9BQS8 1478 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 ABCA5Q8WWZ7 1642 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 ZPR1O75312 459 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 KMT5BQ4FZB7 885 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 PCDHB3Q9Y5E6 796 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 CTTNBP2Q8WZ74 1663 aa8.52□□□□□ -1.05
KNTC1-210ENST00000539013 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
KNTC1-210ENST00000539013 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
KNTC1-210ENST00000539013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
KNTC1-210ENST00000539013 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
KNTC1-210ENST00000539013 COPS2P61201 443 aa8.5□□□□□ -1.05
KNTC1-210ENST00000539013 FMN1Q68DA7 1419 aa8.5□□□□□ -1.05
KNTC1-210ENST00000539013 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
KNTC1-210ENST00000539013 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
KNTC1-210ENST00000539013 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
KNTC1-210ENST00000539013 PRKD2Q9BZL6 878 aa8.49□□□□□ -1.05
KNTC1-210ENST00000539013 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
KNTC1-210ENST00000539013 GNPATO15228 680 aa8.48□□□□□ -1.05
KNTC1-210ENST00000539013 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
KNTC1-210ENST00000539013 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
KNTC1-210ENST00000539013 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
KNTC1-210ENST00000539013 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
KNTC1-210ENST00000539013 SAMD9Q5K651 1589 aa8.47□□□□□ -1.05
KNTC1-210ENST00000539013 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.06
KNTC1-210ENST00000539013 CFHP08603 1231 aa8.46□□□□□ -1.06
KNTC1-210ENST00000539013 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
KNTC1-210ENST00000539013 Q6ZNB5 142 aa8.46□□□□□ -1.06
KNTC1-210ENST00000539013 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
KNTC1-210ENST00000539013 TARBP1Q13395 1621 aaKnown RBP8.45□□□□□ -1.06
KNTC1-210ENST00000539013 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
KNTC1-210ENST00000539013 FHOD3Q2V2M9 1422 aa8.45□□□□□ -1.06
KNTC1-210ENST00000539013 GFRA3O60609 400 aa8.44□□□□□ -1.06
KNTC1-210ENST00000539013 SLC10A3P09131 477 aa8.44□□□□□ -1.06
KNTC1-210ENST00000539013 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
KNTC1-210ENST00000539013 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
KNTC1-210ENST00000539013 GPR37O15354 613 aa8.43□□□□□ -1.06
KNTC1-210ENST00000539013 NR1I2O75469 434 aa8.43□□□□□ -1.06
KNTC1-210ENST00000539013 PHLDB1Q86UU1 1377 aa8.43□□□□□ -1.06
KNTC1-210ENST00000539013 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
KNTC1-210ENST00000539013 NRG2O14511 850 aaPredicted RBP8.42□□□□□ -1.06
KNTC1-210ENST00000539013 DAXXQ9UER7 740 aaPredicted RBP8.42□□□□□ -1.06
KNTC1-210ENST00000539013 TDRD9Q8NDG6 1382 aaKnown RBP8.42□□□□□ -1.06
KNTC1-210ENST00000539013 RAB3GAP2Q9H2M9 1393 aa8.41□□□□□ -1.06
KNTC1-210ENST00000539013 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
KNTC1-210ENST00000539013 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 CCDC18Q5T9S5 1454 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 FECHP22830 423 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
KNTC1-210ENST00000539013 EHBP1L1Q8N3D4 1523 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 RNF223E7ERA6 249 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 ADH1BP00325 375 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 PBRM1Q86U86 1689 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 ADAMTS12P58397 1594 aa8.39□□□□□ -1.07
KNTC1-210ENST00000539013 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
KNTC1-210ENST00000539013 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
KNTC1-210ENST00000539013 MAPKBP1O60336 1514 aa8.38□□□□□ -1.07
KNTC1-210ENST00000539013 MTUS2Q5JR59 1369 aa8.37□□□□□ -1.07
KNTC1-210ENST00000539013 TLL1O43897 1013 aa8.37□□□□□ -1.07
KNTC1-210ENST00000539013 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
KNTC1-210ENST00000539013 WDR62O43379 1518 aa8.37□□□□□ -1.07
KNTC1-210ENST00000539013 HECW1Q76N89 1606 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 IQGAP2Q13576 1575 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 SLC19A1P41440 591 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 FAM50AQ14320 339 aaKnown RBP8.36□□□□□ -1.07
KNTC1-210ENST00000539013 TRAF7Q6Q0C0 670 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 SUPT6HQ7KZ85 1726 aaKnown RBP8.36□□□□□ -1.07
KNTC1-210ENST00000539013 MYOM3Q5VTT5 1437 aa8.36□□□□□ -1.07
KNTC1-210ENST00000539013 ARHGEF11O15085 1522 aa8.35□□□□□ -1.07
KNTC1-210ENST00000539013 UGGT2Q9NYU1 1516 aa8.35□□□□□ -1.07
KNTC1-210ENST00000539013 S1PR4O95977 384 aa8.35□□□□□ -1.07
KNTC1-210ENST00000539013 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
KNTC1-210ENST00000539013 SLC6A16Q9GZN6 736 aa8.35□□□□□ -1.07
KNTC1-210ENST00000539013 ATP1B4Q9UN42 357 aaPredicted RBP8.35□□□□□ -1.07
KNTC1-210ENST00000539013 NCOA2Q15596 1464 aa8.34□□□□□ -1.07
KNTC1-210ENST00000539013 ITGAEP38570 1179 aa8.34□□□□□ -1.07
KNTC1-210ENST00000539013 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
KNTC1-210ENST00000539013 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 GCGRP47871 477 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 LMOD2Q6P5Q4 547 aa8.33□□□□□ -1.08
KNTC1-210ENST00000539013 ZNF598Q86UK7 904 aaKnown RBP8.33□□□□□ -1.08
KNTC1-210ENST00000539013 TCOF1Q13428 1488 aaKnown RBP8.32□□□□□ -1.08
KNTC1-210ENST00000539013 LRRIQ1Q96JM4 1722 aa8.32□□□□□ -1.08
KNTC1-210ENST00000539013 AKNAQ7Z591 1439 aa8.32□□□□□ -1.08
KNTC1-210ENST00000539013 MORN1Q5T089 497 aa8.32□□□□□ -1.08
KNTC1-210ENST00000539013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
KNTC1-210ENST00000539013 SPSB2Q99619 263 aa8.32□□□□□ -1.08
KNTC1-210ENST00000539013 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
KNTC1-210ENST00000539013 KIAA0586Q9BVV6 1533 aa8.32□□□□□ -1.08
KNTC1-210ENST00000539013 MIA2Q96PC5 1412 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PRR20EP86478 221 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms