RNA–Protein interactions for RNA: ENST00000537445.5

PDCD2-205, Transcript of programmed cell death 2, humanhuman

TSL 3 BASIC

Gene PDCD2, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-205ENST00000537445 CDK12Q9NYV4 1490 aaPredicted RBP18.68■□□□□ 0.58
PDCD2-205ENST00000537445 KIAA1210Q9ULL0 1709 aa18.68■□□□□ 0.58
PDCD2-205ENST00000537445 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
PDCD2-205ENST00000537445 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
PDCD2-205ENST00000537445 ATF3P18847 181 aa18.65■□□□□ 0.58
PDCD2-205ENST00000537445 BRINP3Q76B58 766 aa18.65■□□□□ 0.58
PDCD2-205ENST00000537445 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-205ENST00000537445 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-205ENST00000537445 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-205ENST00000537445 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-205ENST00000537445 AFF2P51816 1311 aa18.63■□□□□ 0.57
PDCD2-205ENST00000537445 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
PDCD2-205ENST00000537445 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDCD2-205ENST00000537445 EIF3AQ14152 1382 aaKnown RBP18.62■□□□□ 0.57
PDCD2-205ENST00000537445 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
PDCD2-205ENST00000537445 IFT172Q9UG01 1749 aa18.62■□□□□ 0.57
PDCD2-205ENST00000537445 C11orf95C9JLR9 678 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-205ENST00000537445 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
PDCD2-205ENST00000537445 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
PDCD2-205ENST00000537445 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
PDCD2-205ENST00000537445 SLC24A1O60721 1099 aa18.58■□□□□ 0.56
PDCD2-205ENST00000537445 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
PDCD2-205ENST00000537445 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
PDCD2-205ENST00000537445 RGS12O14924 1447 aa18.57■□□□□ 0.56
PDCD2-205ENST00000537445 NHSL1Q5SYE7 1610 aa18.57■□□□□ 0.56
PDCD2-205ENST00000537445 DCCP43146 1447 aa18.57■□□□□ 0.56
PDCD2-205ENST00000537445 NRXN1Q9ULB1 1477 aa18.56■□□□□ 0.56
PDCD2-205ENST00000537445 MST1RQ04912 1400 aa18.56■□□□□ 0.56
PDCD2-205ENST00000537445 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
PDCD2-205ENST00000537445 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
PDCD2-205ENST00000537445 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
PDCD2-205ENST00000537445 TMF1P82094 1093 aa18.54■□□□□ 0.56
PDCD2-205ENST00000537445 PPLO60437 1756 aa18.54■□□□□ 0.56
PDCD2-205ENST00000537445 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
PDCD2-205ENST00000537445 XRN1Q8IZH2 1706 aaKnown RBP18.53■□□□□ 0.56
PDCD2-205ENST00000537445 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
PDCD2-205ENST00000537445 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
PDCD2-205ENST00000537445 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.56
PDCD2-205ENST00000537445 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
PDCD2-205ENST00000537445 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
PDCD2-205ENST00000537445 DDX17Q92841 729 aaKnown RBP18.52■□□□□ 0.56
PDCD2-205ENST00000537445 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
PDCD2-205ENST00000537445 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
PDCD2-205ENST00000537445 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
PDCD2-205ENST00000537445 EP400Q96L91 3159 aa18.5■□□□□ 0.55
PDCD2-205ENST00000537445 PIK3C2GO75747 1445 aa18.47■□□□□ 0.55
PDCD2-205ENST00000537445 METP08581 1390 aa18.46■□□□□ 0.55
PDCD2-205ENST00000537445 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
PDCD2-205ENST00000537445 TESK2Q96S53 571 aa18.45■□□□□ 0.54
PDCD2-205ENST00000537445 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
PDCD2-205ENST00000537445 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
PDCD2-205ENST00000537445 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
PDCD2-205ENST00000537445 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
PDCD2-205ENST00000537445 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
PDCD2-205ENST00000537445 ADAMTS2O95450 1211 aa18.43■□□□□ 0.54
PDCD2-205ENST00000537445 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
PDCD2-205ENST00000537445 RALBP1Q15311 655 aa18.41■□□□□ 0.54
PDCD2-205ENST00000537445 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
PDCD2-205ENST00000537445 SBNO2Q9Y2G9 1366 aa18.41■□□□□ 0.54
PDCD2-205ENST00000537445 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
PDCD2-205ENST00000537445 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
PDCD2-205ENST00000537445 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
PDCD2-205ENST00000537445 C14orf93Q9H972 538 aaKnown RBP18.39■□□□□ 0.53
PDCD2-205ENST00000537445 USP21Q9UK80 565 aa18.39■□□□□ 0.53
PDCD2-205ENST00000537445 FNBP4Q8N3X1 1017 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-205ENST00000537445 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-205ENST00000537445 ZRANB1Q9UGI0 708 aa18.37■□□□□ 0.53
PDCD2-205ENST00000537445 TRPC5Q9UL62 973 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-205ENST00000537445 ADGRB1O14514 1584 aa18.36■□□□□ 0.53
PDCD2-205ENST00000537445 ATRNO75882 1429 aa18.36■□□□□ 0.53
PDCD2-205ENST00000537445 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
PDCD2-205ENST00000537445 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
PDCD2-205ENST00000537445 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
PDCD2-205ENST00000537445 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
PDCD2-205ENST00000537445 BRD4O60885 1362 aaPredicted RBP18.33■□□□□ 0.53
PDCD2-205ENST00000537445 COL22A1Q8NFW1 1626 aaPredicted RBP18.32■□□□□ 0.52
PDCD2-205ENST00000537445 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
PDCD2-205ENST00000537445 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
PDCD2-205ENST00000537445 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
PDCD2-205ENST00000537445 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDCD2-205ENST00000537445 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
PDCD2-205ENST00000537445 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
PDCD2-205ENST00000537445 PANK3Q9H999 370 aa18.29■□□□□ 0.52
PDCD2-205ENST00000537445 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
PDCD2-205ENST00000537445 MYOM1P52179 1685 aa18.28■□□□□ 0.52
PDCD2-205ENST00000537445 ARHGEF28Q8N1W1 1705 aaKnown RBP18.27■□□□□ 0.52
PDCD2-205ENST00000537445 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
PDCD2-205ENST00000537445 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
PDCD2-205ENST00000537445 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
PDCD2-205ENST00000537445 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
PDCD2-205ENST00000537445 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
PDCD2-205ENST00000537445 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
PDCD2-205ENST00000537445 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
PDCD2-205ENST00000537445 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
PDCD2-205ENST00000537445 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
PDCD2-205ENST00000537445 PXDNQ92626 1479 aa18.23■□□□□ 0.51
PDCD2-205ENST00000537445 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
PDCD2-205ENST00000537445 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
PDCD2-205ENST00000537445 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
PDCD2-205ENST00000537445 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms