RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 SIRT1Q96EB6 747 aa32.35■■■□□ 2.77
PTPMT1-205ENST00000534775 DIP2AQ14689 1571 aa32.35■■■□□ 2.77
PTPMT1-205ENST00000534775 MED14O60244 1454 aa32.34■■■□□ 2.77
PTPMT1-205ENST00000534775 NPC1L1Q9UHC9 1359 aa32.33■■■□□ 2.77
PTPMT1-205ENST00000534775 FAM135BQ49AJ0 1406 aa32.33■■■□□ 2.77
PTPMT1-205ENST00000534775 NINLQ9Y2I6 1382 aa32.32■■■□□ 2.76
PTPMT1-205ENST00000534775 MINK1Q8N4C8 1332 aaPredicted RBP32.31■■■□□ 2.76
PTPMT1-205ENST00000534775 BRD4O60885 1362 aaPredicted RBP32.31■■■□□ 2.76
PTPMT1-205ENST00000534775 CC2D1BQ5T0F9 858 aaKnown RBP32.3■■■□□ 2.76
PTPMT1-205ENST00000534775 ATAD2Q6PL18 1390 aa32.29■■■□□ 2.76
PTPMT1-205ENST00000534775 TMC1Q8TDI8 760 aa32.29■■■□□ 2.76
PTPMT1-205ENST00000534775 AMER1Q5JTC6 1135 aaPredicted RBP32.28■■■□□ 2.76
PTPMT1-205ENST00000534775 SRPK2P78362 688 aaKnown RBP32.27■■■□□ 2.76
PTPMT1-205ENST00000534775 NLRP13Q86W25 1043 aa32.26■■■□□ 2.76
PTPMT1-205ENST00000534775 TBX22Q9Y458 520 aa32.26■■■□□ 2.76
PTPMT1-205ENST00000534775 CABP2Q9NPB3 220 aa32.26■■■□□ 2.75
PTPMT1-205ENST00000534775 WAPLQ7Z5K2 1190 aa32.25■■■□□ 2.75
PTPMT1-205ENST00000534775 SLC12A5Q9H2X9 1139 aa32.24■■■□□ 2.75
PTPMT1-205ENST00000534775 PLEKHH1Q9ULM0 1364 aa32.24■■■□□ 2.75
PTPMT1-205ENST00000534775 USP32Q8NFA0 1604 aa32.22■■■□□ 2.75
PTPMT1-205ENST00000534775 ANKRD36BQ8N2N9 1353 aa32.22■■■□□ 2.75
PTPMT1-205ENST00000534775 FAM9BQ8IZU0 186 aa32.21■■■□□ 2.75
PTPMT1-205ENST00000534775 SLC26A8Q96RN1 970 aa32.21■■■□□ 2.75
PTPMT1-205ENST00000534775 CARD14Q9BXL6 1004 aa32.21■■■□□ 2.75
PTPMT1-205ENST00000534775 CDK19Q9BWU1 502 aa32.2■■■□□ 2.75
PTPMT1-205ENST00000534775 ANKLE2Q86XL3 938 aa32.18■■■□□ 2.74
PTPMT1-205ENST00000534775 NSD3Q9BZ95 1437 aa32.18■■■□□ 2.74
PTPMT1-205ENST00000534775 PIK3R4Q99570 1358 aa32.15■■■□□ 2.74
PTPMT1-205ENST00000534775 ROBO2Q9HCK4 1378 aa32.15■■■□□ 2.74
PTPMT1-205ENST00000534775 PTPRUQ92729 1446 aa32.15■■■□□ 2.74
PTPMT1-205ENST00000534775 HNRNPUQ00839 825 aaKnown RBP eCLIP32.14■■■□□ 2.74
PTPMT1-205ENST00000534775 ADGRB2O60241 1585 aa32.13■■■□□ 2.73
PTPMT1-205ENST00000534775 KDM4FA0A1W2PPD8 638 aa32.13■■■□□ 2.73
PTPMT1-205ENST00000534775 PNISRQ8TF01 805 aaKnown RBP32.13■■■□□ 2.73
PTPMT1-205ENST00000534775 PTCH1Q13635 1447 aa32.12■■■□□ 2.73
PTPMT1-205ENST00000534775 WASLO00401 505 aaPredicted RBP32.11■■■□□ 2.73
PTPMT1-205ENST00000534775 TERF2IPQ9NYB0 399 aa32.11■■■□□ 2.73
PTPMT1-205ENST00000534775 XRN1Q8IZH2 1706 aaKnown RBP32.11■■■□□ 2.73
PTPMT1-205ENST00000534775 AMOTL2Q9Y2J4 779 aa32.09■■■□□ 2.73
PTPMT1-205ENST00000534775 CGNL1Q0VF96 1302 aa32.09■■■□□ 2.73
PTPMT1-205ENST00000534775 NSD2O96028 1365 aa32.08■■■□□ 2.73
PTPMT1-205ENST00000534775 PPP2R1AP30153 589 aa32.08■■■□□ 2.73
PTPMT1-205ENST00000534775 A0A1W2PP64 1363 aa32.07■■■□□ 2.72
PTPMT1-205ENST00000534775 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.06■■■□□ 2.72
PTPMT1-205ENST00000534775 ATP7BP35670 1465 aa32.05■■■□□ 2.72
PTPMT1-205ENST00000534775 HDGFL2Q7Z4V5 671 aaPredicted RBP32.05■■■□□ 2.72
PTPMT1-205ENST00000534775 CD163L1Q9NR16 1453 aa32.03■■■□□ 2.72
PTPMT1-205ENST00000534775 CABP1Q9NZU7 370 aa32■■■□□ 2.71
PTPMT1-205ENST00000534775 NPHP4O75161 1426 aaPredicted RBP32■■■□□ 2.71
PTPMT1-205ENST00000534775 CHD2O14647 1828 aaKnown RBP32■■■□□ 2.71
PTPMT1-205ENST00000534775 MORC1Q86VD1 984 aa31.98■■■□□ 2.71
PTPMT1-205ENST00000534775 PPIP5K1Q6PFW1 1433 aa31.97■■■□□ 2.71
PTPMT1-205ENST00000534775 INSRP06213 1382 aa31.97■■■□□ 2.71
PTPMT1-205ENST00000534775 NUDT16Q96DE0 195 aaKnown RBP31.97■■■□□ 2.71
PTPMT1-205ENST00000534775 ZBED9Q6R2W3 1325 aa31.96■■■□□ 2.71
PTPMT1-205ENST00000534775 ANKRD26Q9UPS8 1709 aa31.95■■■□□ 2.71
PTPMT1-205ENST00000534775 CCDC61Q9Y6R9 512 aa31.94■■■□□ 2.7
PTPMT1-205ENST00000534775 CDC42BPGQ6DT37 1551 aa31.94■■■□□ 2.7
PTPMT1-205ENST00000534775 KIF20BQ96Q89 1820 aa31.92■■■□□ 2.7
PTPMT1-205ENST00000534775 ITSN1Q15811 1721 aa31.92■■■□□ 2.7
PTPMT1-205ENST00000534775 TOPAZ1Q8N9V7 1692 aa31.92■■■□□ 2.7
PTPMT1-205ENST00000534775 KCNA6P17658 529 aa31.91■■■□□ 2.7
PTPMT1-205ENST00000534775 CPSF1Q10570 1443 aaKnown RBP31.9■■■□□ 2.7
PTPMT1-205ENST00000534775 AKAP12Q02952 1782 aa31.89■■■□□ 2.7
PTPMT1-205ENST00000534775 MON2Q7Z3U7 1717 aa31.87■■■□□ 2.69
PTPMT1-205ENST00000534775 EDC4Q6P2E9 1401 aaKnown RBP31.86■■■□□ 2.69
PTPMT1-205ENST00000534775 GTF3C3Q9Y5Q9 886 aa31.86■■■□□ 2.69
PTPMT1-205ENST00000534775 PRR36Q9H6K5 1346 aa31.85■■■□□ 2.69
PTPMT1-205ENST00000534775 WDR43Q15061 677 aaKnown RBP eCLIP31.85■■■□□ 2.69
PTPMT1-205ENST00000534775 SCAF1Q9H7N4 1312 aaKnown RBP31.85■■■□□ 2.69
PTPMT1-205ENST00000534775 NCKAP5LQ9HCH0 1330 aa31.85■■■□□ 2.69
PTPMT1-205ENST00000534775 POLR3AO14802 1390 aaPredicted RBP31.85■■■□□ 2.69
PTPMT1-205ENST00000534775 BLMP54132 1417 aaPredicted RBP31.84■■■□□ 2.69
PTPMT1-205ENST00000534775 ZNF692Q9BU19 519 aaPredicted RBP31.83■■■□□ 2.69
PTPMT1-205ENST00000534775 FYB1O15117 783 aa31.82■■■□□ 2.69
PTPMT1-205ENST00000534775 NWD1Q149M9 1564 aa31.8■■■□□ 2.68
PTPMT1-205ENST00000534775 LMTK3Q96Q04 1460 aa31.8■■■□□ 2.68
PTPMT1-205ENST00000534775 GGNBP2Q9H3C7 697 aa31.79■■■□□ 2.68
PTPMT1-205ENST00000534775 ANKARQ7Z5J8 1434 aa31.79■■■□□ 2.68
PTPMT1-205ENST00000534775 PLEKHG3A1L390 1219 aa31.78■■■□□ 2.68
PTPMT1-205ENST00000534775 TNNT2P45379 298 aaPredicted RBP31.78■■■□□ 2.68
PTPMT1-205ENST00000534775 FMN2Q9NZ56 1722 aa31.78■■■□□ 2.68
PTPMT1-205ENST00000534775 NALCNQ8IZF0 1738 aa31.77■■■□□ 2.68
PTPMT1-205ENST00000534775 CFAP53Q96M91 514 aa31.75■■■□□ 2.67
PTPMT1-205ENST00000534775 ADAMTS8Q9UP79 889 aa31.74■■■□□ 2.67
PTPMT1-205ENST00000534775 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.73■■■□□ 2.67
PTPMT1-205ENST00000534775 NRKQ7Z2Y5 1582 aa31.72■■■□□ 2.67
PTPMT1-205ENST00000534775 MTHFSP49914 203 aa31.71■■■□□ 2.67
PTPMT1-205ENST00000534775 NKTRP30414 1462 aaKnown RBP31.71■■■□□ 2.67
PTPMT1-205ENST00000534775 RGPD8O14715 1765 aaPredicted RBP31.71■■■□□ 2.67
PTPMT1-205ENST00000534775 NUTM2FA1L443 756 aa31.71■■■□□ 2.67
PTPMT1-205ENST00000534775 HSPA2P54652 639 aa31.71■■■□□ 2.67
PTPMT1-205ENST00000534775 ACEP12821 1306 aa31.7■■■□□ 2.67
PTPMT1-205ENST00000534775 ADGRL3Q9HAR2 1447 aa31.7■■■□□ 2.66
PTPMT1-205ENST00000534775 SHPRHQ149N8 1683 aa31.7■■■□□ 2.66
PTPMT1-205ENST00000534775 USP6P35125 1406 aa31.67■■■□□ 2.66
PTPMT1-205ENST00000534775 STRCQ7RTU9 1775 aa31.64■■■□□ 2.66
PTPMT1-205ENST00000534775 NME9Q86XW9 330 aa31.62■■■□□ 2.65
PTPMT1-205ENST00000534775 TTC21BQ7Z4L5 1316 aa31.61■■■□□ 2.65
PTPMT1-205ENST00000534775 SMG6Q86US8 1419 aaKnown RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms