RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
CHKA-207ENST00000533728 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
CHKA-207ENST00000533728 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CHKA-207ENST00000533728 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
CHKA-207ENST00000533728 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
CHKA-207ENST00000533728 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
CHKA-207ENST00000533728 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
CHKA-207ENST00000533728 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
CHKA-207ENST00000533728 BRWD3Q6RI45 1802 aa13.37□□□□□ -0.27
CHKA-207ENST00000533728 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
CHKA-207ENST00000533728 KIF1BO60333 1816 aa13.36□□□□□ -0.27
CHKA-207ENST00000533728 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
CHKA-207ENST00000533728 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
CHKA-207ENST00000533728 BAG6P46379 1132 aa13.35□□□□□ -0.27
CHKA-207ENST00000533728 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
CHKA-207ENST00000533728 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
CHKA-207ENST00000533728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHKA-207ENST00000533728 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
CHKA-207ENST00000533728 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
CHKA-207ENST00000533728 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
CHKA-207ENST00000533728 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
CHKA-207ENST00000533728 KANK1Q14678 1352 aa13.32□□□□□ -0.28
CHKA-207ENST00000533728 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
CHKA-207ENST00000533728 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
CHKA-207ENST00000533728 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
CHKA-207ENST00000533728 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.32□□□□□ -0.28
CHKA-207ENST00000533728 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
CHKA-207ENST00000533728 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
CHKA-207ENST00000533728 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
CHKA-207ENST00000533728 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
CHKA-207ENST00000533728 SLC26A8Q96RN1 970 aa13.31□□□□□ -0.28
CHKA-207ENST00000533728 PRELPP51888 382 aa13.3□□□□□ -0.28
CHKA-207ENST00000533728 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
CHKA-207ENST00000533728 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
CHKA-207ENST00000533728 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
CHKA-207ENST00000533728 ATF3P18847 181 aa13.28□□□□□ -0.28
CHKA-207ENST00000533728 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
CHKA-207ENST00000533728 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
CHKA-207ENST00000533728 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
CHKA-207ENST00000533728 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
CHKA-207ENST00000533728 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
CHKA-207ENST00000533728 NOS1P29475 1434 aa13.27□□□□□ -0.29
CHKA-207ENST00000533728 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
CHKA-207ENST00000533728 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
CHKA-207ENST00000533728 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
CHKA-207ENST00000533728 MYOM2P54296 1465 aa13.24□□□□□ -0.29
CHKA-207ENST00000533728 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
CHKA-207ENST00000533728 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
CHKA-207ENST00000533728 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
CHKA-207ENST00000533728 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
CHKA-207ENST00000533728 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
CHKA-207ENST00000533728 GLI3P10071 1580 aa13.22□□□□□ -0.29
CHKA-207ENST00000533728 SPON1Q9HCB6 807 aa13.21□□□□□ -0.29
CHKA-207ENST00000533728 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
CHKA-207ENST00000533728 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
CHKA-207ENST00000533728 PPLO60437 1756 aa13.21□□□□□ -0.29
CHKA-207ENST00000533728 RGPD1P0DJD0 1748 aa13.21□□□□□ -0.3
CHKA-207ENST00000533728 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
CHKA-207ENST00000533728 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
CHKA-207ENST00000533728 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
CHKA-207ENST00000533728 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
CHKA-207ENST00000533728 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
CHKA-207ENST00000533728 RALBP1Q15311 655 aa13.18□□□□□ -0.3
CHKA-207ENST00000533728 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
CHKA-207ENST00000533728 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
CHKA-207ENST00000533728 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
CHKA-207ENST00000533728 HSPA6P17066 643 aa13.17□□□□□ -0.3
CHKA-207ENST00000533728 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
CHKA-207ENST00000533728 TNS4Q8IZW8 715 aa13.17□□□□□ -0.3
CHKA-207ENST00000533728 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
CHKA-207ENST00000533728 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
CHKA-207ENST00000533728 RGL3Q3MIN7 710 aa13.16□□□□□ -0.3
CHKA-207ENST00000533728 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
CHKA-207ENST00000533728 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
CHKA-207ENST00000533728 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
CHKA-207ENST00000533728 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
CHKA-207ENST00000533728 KCNQ2O43526 872 aa13.15□□□□□ -0.3
CHKA-207ENST00000533728 BCANQ96GW7 911 aa13.15□□□□□ -0.3
CHKA-207ENST00000533728 INSRP06213 1382 aa13.15□□□□□ -0.3
CHKA-207ENST00000533728 NEFLP07196 543 aa13.14□□□□□ -0.31
CHKA-207ENST00000533728 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHKA-207ENST00000533728 TESK2Q96S53 571 aa13.14□□□□□ -0.31
CHKA-207ENST00000533728 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
CHKA-207ENST00000533728 TMF1P82094 1093 aa13.13□□□□□ -0.31
CHKA-207ENST00000533728 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
CHKA-207ENST00000533728 NBPF1Q3BBV0 1214 aa13.13□□□□□ -0.31
CHKA-207ENST00000533728 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
CHKA-207ENST00000533728 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
CHKA-207ENST00000533728 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
CHKA-207ENST00000533728 MYOM1P52179 1685 aa13.12□□□□□ -0.31
CHKA-207ENST00000533728 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
CHKA-207ENST00000533728 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
CHKA-207ENST00000533728 TNS1Q9HBL0 1735 aaKnown RBP13.11□□□□□ -0.31
CHKA-207ENST00000533728 IDI1Q13907 227 aa13.11□□□□□ -0.31
CHKA-207ENST00000533728 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
CHKA-207ENST00000533728 LRPPRCP42704 1394 aaKnown RBP13.1□□□□□ -0.31
CHKA-207ENST00000533728 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
CHKA-207ENST00000533728 DCCP43146 1447 aa13.1□□□□□ -0.31
CHKA-207ENST00000533728 MST1RQ04912 1400 aa13.1□□□□□ -0.31
CHKA-207ENST00000533728 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms