RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
AMBRA1-211ENST00000533727 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
AMBRA1-211ENST00000533727 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
AMBRA1-211ENST00000533727 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
AMBRA1-211ENST00000533727 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
AMBRA1-211ENST00000533727 KDM5BQ9UGL1 1544 aa13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 AMOTL1Q8IY63 956 aa13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 CABP1Q9NZU7 370 aa13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 TOM1O60784 492 aa13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 CHAF1AQ13111 956 aaPredicted RBP13.98□□□□□ -0.17
AMBRA1-211ENST00000533727 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
AMBRA1-211ENST00000533727 IDI1Q13907 227 aa13.96□□□□□ -0.17
AMBRA1-211ENST00000533727 KIF16BQ96L93 1317 aa13.96□□□□□ -0.17
AMBRA1-211ENST00000533727 APAF1O14727 1248 aa13.96□□□□□ -0.17
AMBRA1-211ENST00000533727 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
AMBRA1-211ENST00000533727 CEBPAP49715 358 aaPredicted RBP13.96□□□□□ -0.18
AMBRA1-211ENST00000533727 USP35Q9P2H5 1018 aa13.95□□□□□ -0.18
AMBRA1-211ENST00000533727 MSH6P52701 1360 aa13.95□□□□□ -0.18
AMBRA1-211ENST00000533727 NUP153P49790 1475 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-211ENST00000533727 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-211ENST00000533727 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 MTHFSP49914 203 aa13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 BRD4O60885 1362 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 NBPF1Q3BBV0 1214 aa13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 KIF6Q6ZMV9 814 aa13.94□□□□□ -0.18
AMBRA1-211ENST00000533727 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 HMOX1P09601 288 aa13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 CLUAP1Q96AJ1 413 aa13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 TRIM34Q9BYJ4 488 aa13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 VPS37DQ86XT2 251 aa13.93□□□□□ -0.18
AMBRA1-211ENST00000533727 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 KIF3AQ9Y496 699 aa13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 CABP4P57796 275 aa13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 AAMPQ13685 434 aa13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 CCDC34Q96HJ3 373 aa13.92□□□□□ -0.18
AMBRA1-211ENST00000533727 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
AMBRA1-211ENST00000533727 SLC12A5Q9H2X9 1139 aa13.91□□□□□ -0.18
AMBRA1-211ENST00000533727 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 NRDCO43847 1150 aa13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 GOLGA6L6A8MZA4 724 aa13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■□□□□ 9.5
AMBRA1-211ENST00000533727 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
AMBRA1-211ENST00000533727 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
AMBRA1-211ENST00000533727 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
AMBRA1-211ENST00000533727 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
AMBRA1-211ENST00000533727 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
AMBRA1-211ENST00000533727 RUFY2Q8WXA3 655 aa13.88□□□□□ -0.19
AMBRA1-211ENST00000533727 WASLO00401 505 aaPredicted RBP13.88□□□□□ -0.19
AMBRA1-211ENST00000533727 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-211ENST00000533727 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
AMBRA1-211ENST00000533727 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
AMBRA1-211ENST00000533727 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
AMBRA1-211ENST00000533727 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-211ENST00000533727 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 PPP2R1AP30153 589 aa13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 NEO1Q92859 1461 aa13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-211ENST00000533727 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
AMBRA1-211ENST00000533727 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
AMBRA1-211ENST00000533727 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
AMBRA1-211ENST00000533727 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-211ENST00000533727 ATP10AO60312 1499 aa13.85□□□□□ -0.19
AMBRA1-211ENST00000533727 PTMSP20962 102 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 CTDP1Q9Y5B0 961 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 GNAI3P08754 354 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 NOS1P29475 1434 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 UHRF1BP1Q6BDS2 1440 aa13.84□□□□□ -0.19
AMBRA1-211ENST00000533727 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.19
AMBRA1-211ENST00000533727 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
AMBRA1-211ENST00000533727 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.2
AMBRA1-211ENST00000533727 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
AMBRA1-211ENST00000533727 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
AMBRA1-211ENST00000533727 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms