RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 PKD2Q13563 968 aa5.42□□□□□ -1.54
ATM-221ENST00000533690 NINLQ9Y2I6 1382 aa5.42□□□□□ -1.54
ATM-221ENST00000533690 NCOA3Q9Y6Q9 1424 aa5.41□□□□□ -1.54
ATM-221ENST00000533690 PEAK1Q9H792 1746 aa5.41□□□□□ -1.54
ATM-221ENST00000533690 SIPA1L3O60292 1781 aaPredicted RBP5.41□□□□□ -1.54
ATM-221ENST00000533690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.41□□□□□ -1.545e-7■■□□□ 13.2
ATM-221ENST00000533690 CFDP1Q9UEE9 299 aaPredicted RBP5.41□□□□□ -1.54
ATM-221ENST00000533690 TECPR2O15040 1411 aa5.41□□□□□ -1.54
ATM-221ENST00000533690 ALKQ9UM73 1620 aa5.41□□□□□ -1.54
ATM-221ENST00000533690 PNPLA6Q8IY17 1366 aa5.41□□□□□ -1.54
ATM-221ENST00000533690 CDK12Q9NYV4 1490 aaPredicted RBP5.4□□□□□ -1.54
ATM-221ENST00000533690 MS4A1P11836 297 aa5.4□□□□□ -1.54
ATM-221ENST00000533690 COL22A1Q8NFW1 1626 aaPredicted RBP5.4□□□□□ -1.54
ATM-221ENST00000533690 LMO7Q8WWI1 1683 aa5.4□□□□□ -1.54
ATM-221ENST00000533690 TMEM132AQ24JP5 1023 aa5.4□□□□□ -1.55
ATM-221ENST00000533690 ZNF142P52746 1687 aaPredicted RBP5.4□□□□□ -1.55
ATM-221ENST00000533690 NKTRP30414 1462 aaKnown RBP5.39□□□□□ -1.55
ATM-221ENST00000533690 PRKCSHP14314 528 aaPredicted RBP5.39□□□□□ -1.55
ATM-221ENST00000533690 RRP1P56182 461 aaKnown RBP5.39□□□□□ -1.55
ATM-221ENST00000533690 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
ATM-221ENST00000533690 PIK3R4Q99570 1358 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 USP19O94966 1318 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 MYCNP04198 464 aaPredicted RBP5.38□□□□□ -1.55
ATM-221ENST00000533690 MYT1LQ9UL68 1186 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 U3KPZ7 1027 aaPredicted RBP5.38□□□□□ -1.55
ATM-221ENST00000533690 FAM135BQ49AJ0 1406 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 DDX60Q8IY21 1712 aaKnown RBP5.38□□□□□ -1.55
ATM-221ENST00000533690 NSD2O96028 1365 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 RANGAP1P46060 587 aaPredicted RBP5.38□□□□□ -1.55
ATM-221ENST00000533690 ITGAEP38570 1179 aa5.38□□□□□ -1.55
ATM-221ENST00000533690 HIRIP3Q9BW71 556 aaPredicted RBP5.38□□□□□ -1.55
ATM-221ENST00000533690 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.37□□□□□ -1.55
ATM-221ENST00000533690 NLRP13Q86W25 1043 aa5.37□□□□□ -1.55
ATM-221ENST00000533690 ATF5Q9Y2D1 282 aaPredicted RBP5.37□□□□□ -1.55
ATM-221ENST00000533690 CEP170BQ9Y4F5 1589 aaPredicted RBP5.37□□□□□ -1.55
ATM-221ENST00000533690 PIK3C2AO00443 1686 aa5.37□□□□□ -1.55
ATM-221ENST00000533690 KDM3BQ7LBC6 1761 aa5.37□□□□□ -1.55
ATM-221ENST00000533690 ATP7BP35670 1465 aa5.37□□□□□ -1.55
ATM-221ENST00000533690 DUSP27Q5VZP5 1158 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 TRIM52Q96A61 297 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 RNF39Q9H2S5 420 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 CHIC2Q9UKJ5 165 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 NWD1Q149M9 1564 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 CD109Q6YHK3 1445 aa5.36□□□□□ -1.55
ATM-221ENST00000533690 ABCC6O95255 1503 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 ST20-MTHFSA0A0A6YYL1 179 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 CCDC27Q2M243 656 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 BACH2Q9BYV9 841 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 ABCC11Q96J66 1382 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 NGEFQ8N5V2 710 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 GLI3P10071 1580 aa5.35□□□□□ -1.55
ATM-221ENST00000533690 CPSF1Q10570 1443 aaKnown RBP5.34□□□□□ -1.55
ATM-221ENST00000533690 YTHDC2Q9H6S0 1430 aaKnown RBP5.34□□□□□ -1.55
ATM-221ENST00000533690 HNRNPUQ00839 825 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATM-221ENST00000533690 PLEKHD1A6NEE1 506 aa5.34□□□□□ -1.55
ATM-221ENST00000533690 NBPF1Q3BBV0 1214 aa5.34□□□□□ -1.55
ATM-221ENST00000533690 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.56
ATM-221ENST00000533690 DDIT3P35638 169 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 HNRNPMP52272 730 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATM-221ENST00000533690 C8orf34Q49A92 452 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 SSH2Q76I76 1423 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 PROM2Q8N271 834 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 SLIT1O75093 1534 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 CHD2O14647 1828 aaKnown RBP5.33□□□□□ -1.56
ATM-221ENST00000533690 RPGRIP1LQ68CZ1 1315 aa5.33□□□□□ -1.56
ATM-221ENST00000533690 TCERG1O14776 1098 aaKnown RBP5.32□□□□□ -1.56
ATM-221ENST00000533690 BRPF1P55201 1214 aaPredicted RBP5.32□□□□□ -1.56
ATM-221ENST00000533690 SLFN5Q08AF3 891 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 FBXO3Q9UK99 471 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 PTCH1Q13635 1447 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 PPP2R1AP30153 589 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 CHMP7Q8WUX9 453 aaPredicted RBP5.32□□□□□ -1.56
ATM-221ENST00000533690 MRS2Q9HD23 443 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 NCAPD2Q15021 1401 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 ARHGAP23Q9P227 1491 aa5.32□□□□□ -1.56
ATM-221ENST00000533690 IPO9Q96P70 1041 aaKnown RBP5.32□□□□□ -1.56
ATM-221ENST00000533690 ANKRD36BQ8N2N9 1353 aa5.31□□□□□ -1.56
ATM-221ENST00000533690 TRPM3Q9HCF6 1732 aaPredicted RBP5.31□□□□□ -1.56
ATM-221ENST00000533690 MST1RQ04912 1400 aa5.31□□□□□ -1.56
ATM-221ENST00000533690 A2ML1A8K2U0 1454 aa5.31□□□□□ -1.56
ATM-221ENST00000533690 CARD14Q9BXL6 1004 aa5.31□□□□□ -1.56
ATM-221ENST00000533690 PARP4Q9UKK3 1724 aaKnown RBP5.31□□□□□ -1.56
ATM-221ENST00000533690 PAK3O75914 559 aaPredicted RBP5.31□□□□□ -1.56
ATM-221ENST00000533690 PAPPAQ13219 1627 aa5.31□□□□□ -1.56
ATM-221ENST00000533690 RGS12O14924 1447 aa5.3□□□□□ -1.56
ATM-221ENST00000533690 C14orf93Q9H972 538 aaKnown RBP5.3□□□□□ -1.56
ATM-221ENST00000533690 CACNA1FO60840 1977 aa5.3□□□□□ -1.56
ATM-221ENST00000533690 AAMPQ13685 434 aa5.3□□□□□ -1.56
ATM-221ENST00000533690 PLEKHF1Q96S99 279 aa5.3□□□□□ -1.56
ATM-221ENST00000533690 CARD11Q9BXL7 1154 aa5.3□□□□□ -1.56
ATM-221ENST00000533690 USP35Q9P2H5 1018 aa5.29□□□□□ -1.56
ATM-221ENST00000533690 TPRNQ4KMQ1 711 aa5.29□□□□□ -1.56
ATM-221ENST00000533690 IL17RAQ96F46 866 aa5.29□□□□□ -1.56
ATM-221ENST00000533690 ANTXR1Q9H6X2 564 aa5.29□□□□□ -1.56
ATM-221ENST00000533690 IBTKQ9P2D0 1353 aaPredicted RBP5.29□□□□□ -1.56
ATM-221ENST00000533690 ALS2Q96Q42 1657 aa5.28□□□□□ -1.56
ATM-221ENST00000533690 BBXQ8WY36 941 aaPredicted RBP5.28□□□□□ -1.56
ATM-221ENST00000533690 SPINK5Q9NQ38 1064 aaPredicted RBP5.27□□□□□ -1.57
ATM-221ENST00000533690 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
ATM-221ENST00000533690 NOP58Q9Y2X3 529 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms