RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
CTNND1-236ENST00000533667 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-236ENST00000533667 EIF2S2P20042 333 aaKnown RBP8.48□□□□□ -1.05
CTNND1-236ENST00000533667 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
CTNND1-236ENST00000533667 MBD3O95983 291 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 PSMA5P28066 241 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 CCDC39Q9UFE4 941 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 CT47B1P0C2W7 299 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-236ENST00000533667 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-236ENST00000533667 NFKBIBQ15653 356 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 CCAR2Q8N163 923 aaKnown RBP8.47□□□□□ -1.05
CTNND1-236ENST00000533667 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-236ENST00000533667 ERICH2A1L162 156 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 GNAI3P08754 354 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
CTNND1-236ENST00000533667 NAT10Q9H0A0 1025 aaKnown RBP8.47□□□□□ -1.05
CTNND1-236ENST00000533667 LNPKQ9C0E8 428 aa8.46□□□□□ -1.05
CTNND1-236ENST00000533667 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.05
CTNND1-236ENST00000533667 EFCAB5A4FU69 1503 aa8.46□□□□□ -1.05
CTNND1-236ENST00000533667 VPS37CA5D8V6 355 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-236ENST00000533667 ZNF771Q7L3S4 317 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-236ENST00000533667 GCC1Q96CN9 775 aa8.46□□□□□ -1.06
CTNND1-236ENST00000533667 HOMER1Q86YM7 354 aa8.46□□□□□ -1.06
CTNND1-236ENST00000533667 HIP1O00291 1037 aa8.45□□□□□ -1.06
CTNND1-236ENST00000533667 EVA1CP58658 441 aa8.45□□□□□ -1.06
CTNND1-236ENST00000533667 FOXD4L6Q3SYB3 417 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-236ENST00000533667 FOXD4L3Q6VB84 417 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-236ENST00000533667 ZNF592Q92610 1267 aa8.45□□□□□ -1.06
CTNND1-236ENST00000533667 UBTFL1P0CB47 393 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-236ENST00000533667 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
CTNND1-236ENST00000533667 DHX8Q14562 1220 aaKnown RBP8.45□□□□□ -1.06
CTNND1-236ENST00000533667 RABEP1Q15276 862 aa8.45□□□□□ -1.06
CTNND1-236ENST00000533667 CNTROBQ8N137 903 aa8.45□□□□□ -1.06
CTNND1-236ENST00000533667 PDCP20941 246 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 CDR1P51861 262 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 PSME1Q06323 249 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 RALYLQ86SE5 291 aaKnown RBP8.44□□□□□ -1.06
CTNND1-236ENST00000533667 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-236ENST00000533667 PLEKHH2Q8IVE3 1493 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 NASPP49321 788 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-236ENST00000533667 NFXL1Q6ZNB6 911 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 PANK1Q8TE04 598 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 NCAPD3P42695 1498 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 EHBP1L1Q8N3D4 1523 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 PPP2R1AP30153 589 aa8.44□□□□□ -1.06
CTNND1-236ENST00000533667 CCDC30Q5VVM6 783 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 TCP11L2Q8N4U5 519 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 RAPGEF4Q8WZA2 1011 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 XBP1P17861 261 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 CLASRPQ8N2M8 674 aaKnown RBP8.43□□□□□ -1.06
CTNND1-236ENST00000533667 MNS1Q8NEH6 495 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 OLFM4Q6UX06 510 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 CWC22Q9HCG8 908 aaKnown RBP8.43□□□□□ -1.06
CTNND1-236ENST00000533667 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
CTNND1-236ENST00000533667 RAD54L2Q9Y4B4 1467 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 KIAA1107Q9UPP5 1409 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 CCP110O43303 1012 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
CTNND1-236ENST00000533667 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 MTHFSP49914 203 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 AK7Q96M32 723 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 IFT57Q9NWB7 429 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 TCEAL9Q9UHQ7 104 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 PRDM2Q13029 1718 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 ZNF644Q9H582 1327 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-236ENST00000533667 TRAK2O60296 914 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 WDR63Q8IWG1 891 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 GGNBP2Q9H3C7 697 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 FAM13BQ9NYF5 915 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 SYNJ2O15056 1496 aa8.42□□□□□ -1.06
CTNND1-236ENST00000533667 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
CTNND1-236ENST00000533667 GRIN2BQ13224 1484 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
CTNND1-236ENST00000533667 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.41□□□□□ -1.06
CTNND1-236ENST00000533667 ARHGAP5Q13017 1502 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 HMOX1P09601 288 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 CCDC173Q0VFZ6 552 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 ZNF428Q96B54 188 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 RUFY1Q96T51 708 aa8.41□□□□□ -1.06
CTNND1-236ENST00000533667 DHX16O60231 1041 aaKnown RBP8.4□□□□□ -1.06
CTNND1-236ENST00000533667 HSP90B2PQ58FF3 399 aa8.4□□□□□ -1.06
CTNND1-236ENST00000533667 ERCC4Q92889 916 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-236ENST00000533667 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
CTNND1-236ENST00000533667 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-236ENST00000533667 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
CTNND1-236ENST00000533667 SART3Q15020 963 aaKnown RBP8.4□□□□□ -1.07
CTNND1-236ENST00000533667 SDF4Q9BRK5 362 aa8.4□□□□□ -1.07
CTNND1-236ENST00000533667 CTDP1Q9Y5B0 961 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-236ENST00000533667 TSPY26PQ9H489 355 aa8.4□□□□□ -1.07
CTNND1-236ENST00000533667 ARAP1Q96P48 1450 aa8.39□□□□□ -1.07
CTNND1-236ENST00000533667 PIP4K2AP48426 406 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms