RNA–Protein interactions for RNA: ENST00000533524.5

SLC43A3-225, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SLC43A3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-225ENST00000533524 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.07
SLC43A3-225ENST00000533524 SAFB2Q14151 953 aaKnown RBP eCLIP28■■■□□ 2.07
SLC43A3-225ENST00000533524 TECPR2O15040 1411 aa28■■■□□ 2.07
SLC43A3-225ENST00000533524 NINLQ9Y2I6 1382 aa28■■■□□ 2.07
SLC43A3-225ENST00000533524 KNDC1Q76NI1 1749 aa27.99■■■□□ 2.07
SLC43A3-225ENST00000533524 FAM135BQ49AJ0 1406 aa27.98■■■□□ 2.07
SLC43A3-225ENST00000533524 CEP170BQ9Y4F5 1589 aaPredicted RBP27.97■■■□□ 2.07
SLC43A3-225ENST00000533524 HNRNPUQ00839 825 aaKnown RBP eCLIP27.97■■■□□ 2.07
SLC43A3-225ENST00000533524 PNISRQ8TF01 805 aaKnown RBP27.97■■■□□ 2.07
SLC43A3-225ENST00000533524 MINK1Q8N4C8 1332 aaPredicted RBP27.97■■■□□ 2.07
SLC43A3-225ENST00000533524 ATAD2Q6PL18 1390 aa27.96■■■□□ 2.07
SLC43A3-225ENST00000533524 CARD14Q9BXL6 1004 aa27.96■■■□□ 2.07
SLC43A3-225ENST00000533524 MED14O60244 1454 aa27.96■■■□□ 2.07
SLC43A3-225ENST00000533524 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.07
SLC43A3-225ENST00000533524 CABP2Q9NPB3 220 aa27.95■■■□□ 2.06
SLC43A3-225ENST00000533524 SRPK2P78362 688 aaKnown RBP27.93■■■□□ 2.06
SLC43A3-225ENST00000533524 CPS1P31327 1500 aa27.93■■■□□ 2.06
SLC43A3-225ENST00000533524 ANKRD36BQ8N2N9 1353 aa27.91■■■□□ 2.06
SLC43A3-225ENST00000533524 TBX22Q9Y458 520 aa27.91■■■□□ 2.06
SLC43A3-225ENST00000533524 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
SLC43A3-225ENST00000533524 WAPLQ7Z5K2 1190 aa27.91■■■□□ 2.06
SLC43A3-225ENST00000533524 PLEKHH1Q9ULM0 1364 aa27.9■■■□□ 2.06
SLC43A3-225ENST00000533524 DIP2AQ14689 1571 aa27.9■■■□□ 2.06
SLC43A3-225ENST00000533524 ZNF142P52746 1687 aaPredicted RBP27.89■■■□□ 2.06
SLC43A3-225ENST00000533524 CDK19Q9BWU1 502 aa27.89■■■□□ 2.06
SLC43A3-225ENST00000533524 NSD3Q9BZ95 1437 aa27.88■■■□□ 2.05
SLC43A3-225ENST00000533524 USP32Q8NFA0 1604 aa27.88■■■□□ 2.05
SLC43A3-225ENST00000533524 PPP2R1AP30153 589 aa27.87■■■□□ 2.05
SLC43A3-225ENST00000533524 GTF3C3Q9Y5Q9 886 aa27.87■■■□□ 2.05
SLC43A3-225ENST00000533524 SETD1BQ9UPS6 1966 aaKnown RBP27.85■■■□□ 2.05
SLC43A3-225ENST00000533524 SLC26A8Q96RN1 970 aa27.83■■■□□ 2.04
SLC43A3-225ENST00000533524 TERF2IPQ9NYB0 399 aa27.83■■■□□ 2.04
SLC43A3-225ENST00000533524 CGNL1Q0VF96 1302 aa27.82■■■□□ 2.04
SLC43A3-225ENST00000533524 ZBED9Q6R2W3 1325 aa27.82■■■□□ 2.04
SLC43A3-225ENST00000533524 INSRP06213 1382 aa27.82■■■□□ 2.04
SLC43A3-225ENST00000533524 WASLO00401 505 aaPredicted RBP27.81■■■□□ 2.04
SLC43A3-225ENST00000533524 NSD2O96028 1365 aa27.81■■■□□ 2.04
SLC43A3-225ENST00000533524 ROBO2Q9HCK4 1378 aa27.81■■■□□ 2.04
SLC43A3-225ENST00000533524 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
SLC43A3-225ENST00000533524 ANKLE2Q86XL3 938 aa27.79■■■□□ 2.04
SLC43A3-225ENST00000533524 PIK3R4Q99570 1358 aa27.78■■■□□ 2.04
SLC43A3-225ENST00000533524 A0A1W2PP64 1363 aa27.78■■■□□ 2.04
SLC43A3-225ENST00000533524 HDGFL2Q7Z4V5 671 aaPredicted RBP27.76■■■□□ 2.04
SLC43A3-225ENST00000533524 PTCH1Q13635 1447 aa27.76■■■□□ 2.03
SLC43A3-225ENST00000533524 AMOTL2Q9Y2J4 779 aa27.75■■■□□ 2.03
SLC43A3-225ENST00000533524 CD163L1Q9NR16 1453 aa27.75■■■□□ 2.03
SLC43A3-225ENST00000533524 ADGRB2O60241 1585 aa27.75■■■□□ 2.03
SLC43A3-225ENST00000533524 MORC1Q86VD1 984 aa27.74■■■□□ 2.03
SLC43A3-225ENST00000533524 ATP7BP35670 1465 aa27.74■■■□□ 2.03
SLC43A3-225ENST00000533524 CABP1Q9NZU7 370 aa27.73■■■□□ 2.03
SLC43A3-225ENST00000533524 XRN1Q8IZH2 1706 aaKnown RBP27.68■■■□□ 2.02
SLC43A3-225ENST00000533524 NUDT16Q96DE0 195 aaKnown RBP27.68■■■□□ 2.02
SLC43A3-225ENST00000533524 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
SLC43A3-225ENST00000533524 CCDC61Q9Y6R9 512 aa27.67■■■□□ 2.02
SLC43A3-225ENST00000533524 BLMP54132 1417 aaPredicted RBP27.66■■■□□ 2.02
SLC43A3-225ENST00000533524 PPIP5K1Q6PFW1 1433 aa27.66■■■□□ 2.02
SLC43A3-225ENST00000533524 POLR3AO14802 1390 aaPredicted RBP27.64■■■□□ 2.02
SLC43A3-225ENST00000533524 WDR43Q15061 677 aaKnown RBP eCLIP27.64■■■□□ 2.02
SLC43A3-225ENST00000533524 CPSF1Q10570 1443 aaKnown RBP27.63■■■□□ 2.01
SLC43A3-225ENST00000533524 NPHP4O75161 1426 aaPredicted RBP27.6■■■□□ 2.01
SLC43A3-225ENST00000533524 FYB1O15117 783 aa27.6■■■□□ 2.01
SLC43A3-225ENST00000533524 CDC42BPGQ6DT37 1551 aa27.6■■■□□ 2.01
SLC43A3-225ENST00000533524 ADAMTS8Q9UP79 889 aa27.59■■■□□ 2.01
SLC43A3-225ENST00000533524 ANKRD26Q9UPS8 1709 aa27.59■■■□□ 2.01
SLC43A3-225ENST00000533524 PRR36Q9H6K5 1346 aa27.59■■■□□ 2.01
SLC43A3-225ENST00000533524 EDC4Q6P2E9 1401 aaKnown RBP27.58■■■□□ 2.01
SLC43A3-225ENST00000533524 KCNA6P17658 529 aa27.57■■■□□ 2
SLC43A3-225ENST00000533524 ZNF692Q9BU19 519 aaPredicted RBP27.57■■■□□ 2
SLC43A3-225ENST00000533524 CHD2O14647 1828 aaKnown RBP27.55■■■□□ 2
SLC43A3-225ENST00000533524 GGNBP2Q9H3C7 697 aa27.55■■■□□ 2
SLC43A3-225ENST00000533524 PLEKHG3A1L390 1219 aa27.55■■■□□ 2
SLC43A3-225ENST00000533524 CFAP53Q96M91 514 aa27.55■■■□□ 2
SLC43A3-225ENST00000533524 KIF20BQ96Q89 1820 aa27.54■■■□□ 2
SLC43A3-225ENST00000533524 TNNT2P45379 298 aaPredicted RBP27.54■■■□□ 2
SLC43A3-225ENST00000533524 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
SLC43A3-225ENST00000533524 SMG6Q86US8 1419 aaKnown RBP27.53■■■□□ 2
SLC43A3-225ENST00000533524 MTHFSP49914 203 aa27.52■■■□□ 2
SLC43A3-225ENST00000533524 AKAP12Q02952 1782 aa27.51■■■□□ 2
SLC43A3-225ENST00000533524 MON2Q7Z3U7 1717 aa27.51■■□□□ 1.99
SLC43A3-225ENST00000533524 ITSN1Q15811 1721 aa27.5■■□□□ 1.99
SLC43A3-225ENST00000533524 NCKAP5LQ9HCH0 1330 aa27.5■■□□□ 1.99
SLC43A3-225ENST00000533524 PDE3BQ13370 1112 aa27.5■■□□□ 1.99
SLC43A3-225ENST00000533524 ANKARQ7Z5J8 1434 aa27.48■■□□□ 1.99
SLC43A3-225ENST00000533524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.48■■□□□ 1.99
SLC43A3-225ENST00000533524 NUDCQ9Y266 331 aa27.47■■□□□ 1.99
SLC43A3-225ENST00000533524 NEFLP07196 543 aa27.45■■□□□ 1.99
SLC43A3-225ENST00000533524 ACEP12821 1306 aa27.44■■□□□ 1.98
SLC43A3-225ENST00000533524 SHPRHQ149N8 1683 aa27.43■■□□□ 1.98
SLC43A3-225ENST00000533524 NGEFQ8N5V2 710 aa27.42■■□□□ 1.98
SLC43A3-225ENST00000533524 NKTRP30414 1462 aaKnown RBP27.41■■□□□ 1.98
SLC43A3-225ENST00000533524 NWD1Q149M9 1564 aa27.41■■□□□ 1.98
SLC43A3-225ENST00000533524 FMN2Q9NZ56 1722 aa27.41■■□□□ 1.98
SLC43A3-225ENST00000533524 NUTM2FA1L443 756 aa27.4■■□□□ 1.98
SLC43A3-225ENST00000533524 SUPT16HQ9Y5B9 1047 aaKnown RBP27.4■■□□□ 1.98
SLC43A3-225ENST00000533524 SENP3-EIF4A1A0A087X0R7 540 aa27.4■■□□□ 1.98
SLC43A3-225ENST00000533524 USP6P35125 1406 aa27.4■■□□□ 1.98
SLC43A3-225ENST00000533524 NME9Q86XW9 330 aa27.4■■□□□ 1.98
SLC43A3-225ENST00000533524 TTC21BQ7Z4L5 1316 aa27.38■■□□□ 1.97
SLC43A3-225ENST00000533524 COG3Q96JB2 828 aa27.38■■□□□ 1.97
SLC43A3-225ENST00000533524 NRKQ7Z2Y5 1582 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms