RNA–Protein interactions for RNA: ENST00000532224.5

PTPN22-209, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 2,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-209ENST00000532224 PPP1R18Q6NYC8 613 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 PRKD2Q9BZL6 878 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 NRG2O14511 850 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-209ENST00000532224 SEMA3EO15041 775 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 COPS2P61201 443 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 FANCD2Q9BXW9 1451 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 DISP3Q9P2K9 1392 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 EEA1Q15075 1411 aa3.66□□□□□ -1.82
PTPN22-209ENST00000532224 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.82
PTPN22-209ENST00000532224 GNPATO15228 680 aa3.65□□□□□ -1.83
PTPN22-209ENST00000532224 CFHP08603 1231 aa3.65□□□□□ -1.83
PTPN22-209ENST00000532224 PXYLP1Q8TE99 480 aa3.65□□□□□ -1.83
PTPN22-209ENST00000532224 ZNF516Q92618 1163 aa3.65□□□□□ -1.83
PTPN22-209ENST00000532224 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
PTPN22-209ENST00000532224 ABCA10Q8WWZ4 1543 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 SULF1Q8IWU6 871 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 EIF4G3O43432 1585 aaKnown RBP3.64□□□□□ -1.83
PTPN22-209ENST00000532224 ADAMTS12P58397 1594 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 MAGI1Q96QZ7 1491 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-209ENST00000532224 TOPBP1Q92547 1522 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 SHROOM2Q13796 1616 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 GFRA3O60609 400 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 HAP1P54257 671 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-209ENST00000532224 BLOC1S3Q6QNY0 202 aa3.64□□□□□ -1.83
PTPN22-209ENST00000532224 ADH1BP00325 375 aa3.63□□□□□ -1.83
PTPN22-209ENST00000532224 METTL3Q86U44 580 aaKnown RBP3.63□□□□□ -1.83
PTPN22-209ENST00000532224 ANKLE1Q8NAG6 615 aa3.63□□□□□ -1.83
PTPN22-209ENST00000532224 KIF21BO75037 1637 aa3.63□□□□□ -1.83
PTPN22-209ENST00000532224 DAXXQ9UER7 740 aaPredicted RBP3.63□□□□□ -1.83
PTPN22-209ENST00000532224 WIPF1O43516 503 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 GRIPAP1Q4V328 841 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 GPIHBP1Q8IV16 184 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 CHD1O14646 1710 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 RBM26Q5T8P6 1007 aaKnown RBP3.62□□□□□ -1.83
PTPN22-209ENST00000532224 VSIG10Q8N0Z9 540 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 NKX2-3Q8TAU0 364 aa3.62□□□□□ -1.83
PTPN22-209ENST00000532224 NESP48681 1621 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 SYNJ1O43426 1573 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 URB2Q14146 1524 aaKnown RBP3.61□□□□□ -1.83
PTPN22-209ENST00000532224 SLC19A1P41440 591 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 RDH13Q8NBN7 331 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 PDZRN3Q9UPQ7 1066 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 CUX1P39880 1505 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 ARAP1Q96P48 1450 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 RNF223E7ERA6 249 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 SLC10A3P09131 477 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
PTPN22-209ENST00000532224 LMOD2Q6P5Q4 547 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 SLC6A16Q9GZN6 736 aa3.61□□□□□ -1.83
PTPN22-209ENST00000532224 LCE2BO14633 110 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 GPR37O15354 613 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 ATP6V1AP38606 617 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 PRR20EP86478 221 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 PRR20CP86479 221 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 PRR20DP86480 221 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 PRR20BP86481 221 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 PRR20AP86496 221 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 FAM161AQ3B820 660 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 ZNF598Q86UK7 904 aaKnown RBP3.6□□□□□ -1.83
PTPN22-209ENST00000532224 SALL2Q9Y467 1007 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-209ENST00000532224 CLASP1Q7Z460 1538 aa3.6□□□□□ -1.83
PTPN22-209ENST00000532224 FMNL1O95466 1100 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-209ENST00000532224 S1PR4O95977 384 aa3.59□□□□□ -1.83
PTPN22-209ENST00000532224 Q3C1V9 767 aa3.59□□□□□ -1.83
PTPN22-209ENST00000532224 SCUBE3Q8IX30 993 aa3.59□□□□□ -1.83
PTPN22-209ENST00000532224 SPSB2Q99619 263 aa3.59□□□□□ -1.83
PTPN22-209ENST00000532224 DDX11L8A8MPP1 907 aa3.59□□□□□ -1.84
PTPN22-209ENST00000532224 TLL1O43897 1013 aa3.59□□□□□ -1.84
PTPN22-209ENST00000532224 DGAT1O75907 488 aa3.59□□□□□ -1.84
PTPN22-209ENST00000532224 MAP2K5Q13163 448 aa3.59□□□□□ -1.84
PTPN22-209ENST00000532224 SPRYD7Q5W111 196 aa3.59□□□□□ -1.84
PTPN22-209ENST00000532224 EFCAB5A4FU69 1503 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 RUSC2Q8N2Y8 1516 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 POLA1P09884 1462 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-209ENST00000532224 GCGRP47871 477 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 RPIAP49247 311 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 GRIN2BQ13224 1484 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 USP46P62068 366 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 MORN1Q5T089 497 aa3.58□□□□□ -1.84
PTPN22-209ENST00000532224 MINK1Q8N4C8 1332 aaPredicted RBP3.57□□□□□ -1.84
PTPN22-209ENST00000532224 HECW2Q9P2P5 1572 aa3.57□□□□□ -1.84
PTPN22-209ENST00000532224 WRNQ14191 1432 aaPredicted RBP eCLIP3.57□□□□□ -1.84
PTPN22-209ENST00000532224 PKDCCQ504Y2 493 aa3.57□□□□□ -1.84
PTPN22-209ENST00000532224 ZNF697Q5TEC3 545 aa3.57□□□□□ -1.84
PTPN22-209ENST00000532224 FGD5Q6ZNL6 1462 aa3.57□□□□□ -1.84
PTPN22-209ENST00000532224 CD2BP2O95400 341 aaKnown RBP3.56□□□□□ -1.84
PTPN22-209ENST00000532224 MSS51Q4VC12 460 aa3.56□□□□□ -1.84
PTPN22-209ENST00000532224 FECHP22830 423 aa3.56□□□□□ -1.84
PTPN22-209ENST00000532224 FUT2Q10981 343 aa3.56□□□□□ -1.84
PTPN22-209ENST00000532224 SYNJ2O15056 1496 aa3.56□□□□□ -1.84
PTPN22-209ENST00000532224 PUS10Q3MIT2 529 aaKnown RBP3.55□□□□□ -1.84
PTPN22-209ENST00000532224 SAMD9Q5K651 1589 aa3.55□□□□□ -1.84
PTPN22-209ENST00000532224 IRF6O14896 467 aa3.55□□□□□ -1.84
PTPN22-209ENST00000532224 ZBTB24O43167 697 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-209ENST00000532224 CLCN1P35523 988 aa3.55□□□□□ -1.84
PTPN22-209ENST00000532224 THAP11Q96EK4 314 aa3.55□□□□□ -1.84
PTPN22-209ENST00000532224 KDM2AQ9Y2K7 1162 aa3.55□□□□□ -1.84
PTPN22-209ENST00000532224 CD46P15529 392 aa3.54□□□□□ -1.84
PTPN22-209ENST00000532224 BRICD5Q6PL45 260 aa3.54□□□□□ -1.84
PTPN22-209ENST00000532224 LIAT1Q6ZQX7 453 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms