RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
CHD7-210ENST00000531695 NCOA1Q15788 1441 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 ANP32CO43423 234 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 KDM5DQ9BY66 1539 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 PZPP20742 1482 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 CAMSAP2Q08AD1 1489 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 CNTLNQ9NXG0 1405 aa8.12□□□□□ -1.11
CHD7-210ENST00000531695 SPDYE16A6NNV3 312 aaPredicted RBP8.11□□□□□ -1.11
CHD7-210ENST00000531695 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
CHD7-210ENST00000531695 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
CHD7-210ENST00000531695 GPATCH8Q9UKJ3 1502 aaKnown RBP8.11□□□□□ -1.11
CHD7-210ENST00000531695 SPATA31E1Q6ZUB1 1445 aa8.11□□□□□ -1.11
CHD7-210ENST00000531695 KIF14Q15058 1648 aa8.11□□□□□ -1.11
CHD7-210ENST00000531695 SOWAHBA6NEL2 793 aa8.1□□□□□ -1.11
CHD7-210ENST00000531695 GOLGA8CPA6NN73 597 aa8.1□□□□□ -1.11
CHD7-210ENST00000531695 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
CHD7-210ENST00000531695 ABCC10Q5T3U5 1492 aa8.09□□□□□ -1.11
CHD7-210ENST00000531695 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
CHD7-210ENST00000531695 EN1Q05925 392 aaPredicted RBP8.09□□□□□ -1.11
CHD7-210ENST00000531695 AMER1Q5JTC6 1135 aaPredicted RBP8.09□□□□□ -1.11
CHD7-210ENST00000531695 NYAP1Q6ZVC0 841 aa8.09□□□□□ -1.11
CHD7-210ENST00000531695 MPHOSPH9Q99550 1183 aa8.09□□□□□ -1.11
CHD7-210ENST00000531695 KIAA1468Q9P260 1216 aa8.09□□□□□ -1.11
CHD7-210ENST00000531695 A0A0G2JS52 829 aa8.08□□□□□ -1.12
CHD7-210ENST00000531695 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
CHD7-210ENST00000531695 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
CHD7-210ENST00000531695 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
CHD7-210ENST00000531695 WASHC2AQ641Q2 1341 aa8.07□□□□□ -1.12
CHD7-210ENST00000531695 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
CHD7-210ENST00000531695 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
CHD7-210ENST00000531695 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
CHD7-210ENST00000531695 CCDC7Q96M83 1385 aa8.07□□□□□ -1.12
CHD7-210ENST00000531695 UHRF1BP1Q6BDS2 1440 aa8.06□□□□□ -1.12
CHD7-210ENST00000531695 CARMIL2Q6F5E8 1435 aa8.06□□□□□ -1.12
CHD7-210ENST00000531695 KIAA1107Q9UPP5 1409 aa8.06□□□□□ -1.12
CHD7-210ENST00000531695 ARHGEF12Q9NZN5 1544 aa8.06□□□□□ -1.12
CHD7-210ENST00000531695 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
CHD7-210ENST00000531695 KDM5CP41229 1560 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 PTPRGP23470 1445 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 PRG4Q92954 1404 aaPredicted RBP8.05□□□□□ -1.12
CHD7-210ENST00000531695 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHD7-210ENST00000531695 E2F4Q16254 413 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
CHD7-210ENST00000531695 DDX12PQ92771 950 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 L3MBTL2Q969R5 705 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 MAST1Q9Y2H9 1570 aa8.05□□□□□ -1.12
CHD7-210ENST00000531695 PREX2Q70Z35 1606 aa8.04□□□□□ -1.12
CHD7-210ENST00000531695 HIRIP3Q9BW71 556 aaPredicted RBP8.04□□□□□ -1.12
CHD7-210ENST00000531695 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
CHD7-210ENST00000531695 TSKSQ9UJT2 592 aa8.04□□□□□ -1.12
CHD7-210ENST00000531695 BCORL1Q5H9F3 1711 aa8.03□□□□□ -1.12
CHD7-210ENST00000531695 RALGAPBQ86X10 1494 aa8.03□□□□□ -1.12
CHD7-210ENST00000531695 BCAMP50895 628 aa8.03□□□□□ -1.12
CHD7-210ENST00000531695 CHIC2Q9UKJ5 165 aa8.03□□□□□ -1.12
CHD7-210ENST00000531695 SHROOM2Q13796 1616 aa8.03□□□□□ -1.12
CHD7-210ENST00000531695 E9PCH4 1651 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 ATP10BO94823 1461 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 ANKRD30AQ9BXX3 1397 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 ERICH6BQ5W0A0 696 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 CERKQ8TCT0 537 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 CDC42BPBQ9Y5S2 1711 aa8.02□□□□□ -1.13
CHD7-210ENST00000531695 ZNF644Q9H582 1327 aaPredicted RBP8.02□□□□□ -1.13
CHD7-210ENST00000531695 UNC13BO14795 1591 aa8.01□□□□□ -1.13
CHD7-210ENST00000531695 ERCC6Q03468 1493 aa8.01□□□□□ -1.13
CHD7-210ENST00000531695 LAMC1P11047 1609 aa8.01□□□□□ -1.13
CHD7-210ENST00000531695 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
CHD7-210ENST00000531695 NBR1Q14596 966 aa8.01□□□□□ -1.13
CHD7-210ENST00000531695 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
CHD7-210ENST00000531695 NBPF8Q3BBV2 869 aa8.01□□□□□ -1.13
CHD7-210ENST00000531695 ARID4BQ4LE39 1312 aaPredicted RBP8.01□□□□□ -1.13
CHD7-210ENST00000531695 NEFLP07196 543 aa8□□□□□ -1.13
CHD7-210ENST00000531695 RBM33Q96EV2 1170 aaKnown RBP8□□□□□ -1.13
CHD7-210ENST00000531695 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
CHD7-210ENST00000531695 WBP1LQ9NX94 342 aa8□□□□□ -1.13
CHD7-210ENST00000531695 SEPT9Q9UHD8 586 aaPredicted RBP8□□□□□ -1.13
CHD7-210ENST00000531695 C9orf84Q5VXU9 1444 aa8□□□□□ -1.13
CHD7-210ENST00000531695 ANKRD50Q9ULJ7 1429 aa8□□□□□ -1.13
CHD7-210ENST00000531695 SAMD9LQ8IVG5 1584 aa8□□□□□ -1.13
CHD7-210ENST00000531695 C11orf95C9JLR9 678 aaPredicted RBP7.99□□□□□ -1.13
CHD7-210ENST00000531695 PLXNC1O60486 1568 aa7.99□□□□□ -1.13
CHD7-210ENST00000531695 OSBPP22059 807 aa7.99□□□□□ -1.13
CHD7-210ENST00000531695 PRSS12P56730 875 aa7.99□□□□□ -1.13
CHD7-210ENST00000531695 PACS2Q86VP3 889 aa7.99□□□□□ -1.13
CHD7-210ENST00000531695 PRKRIP1Q9H875 184 aaPredicted RBP7.99□□□□□ -1.13
CHD7-210ENST00000531695 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
CHD7-210ENST00000531695 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
CHD7-210ENST00000531695 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
CHD7-210ENST00000531695 DHX29Q7Z478 1369 aaKnown RBP7.98□□□□□ -1.13
CHD7-210ENST00000531695 MAP3K7O43318 606 aa7.98□□□□□ -1.13
CHD7-210ENST00000531695 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
CHD7-210ENST00000531695 TSR3Q9UJK0 312 aaKnown RBP7.98□□□□□ -1.13
CHD7-210ENST00000531695 CCDC141Q6ZP82 1450 aa7.98□□□□□ -1.13
CHD7-210ENST00000531695 KIF7Q2M1P5 1343 aa7.98□□□□□ -1.13
CHD7-210ENST00000531695 TTC13Q8NBP0 860 aa7.97□□□□□ -1.13
CHD7-210ENST00000531695 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.97□□□□□ -1.13
CHD7-210ENST00000531695 CHD1O14646 1710 aa7.97□□□□□ -1.13
CHD7-210ENST00000531695 ZBED9Q6R2W3 1325 aa7.97□□□□□ -1.13
CHD7-210ENST00000531695 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms