RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-221ENST00000531582 APLP1P51693 650 aa7.06□□□□□ -1.28
ECHDC1-221ENST00000531582 PTPN5P54829 565 aa7.06□□□□□ -1.28
ECHDC1-221ENST00000531582 MORN1Q5T089 497 aa7.05□□□□□ -1.28
ECHDC1-221ENST00000531582 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-221ENST00000531582 ZBTB3Q9H5J0 574 aa7.05□□□□□ -1.28
ECHDC1-221ENST00000531582 GTF3C3Q9Y5Q9 886 aa7.05□□□□□ -1.28
ECHDC1-221ENST00000531582 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-221ENST00000531582 NDUFV2P19404 249 aa7.04□□□□□ -1.28
ECHDC1-221ENST00000531582 PPP2R2DQ66LE6 453 aa7.04□□□□□ -1.28
ECHDC1-221ENST00000531582 FMNL1O95466 1100 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-221ENST00000531582 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
ECHDC1-221ENST00000531582 MTMR2Q13614 643 aa7.03□□□□□ -1.28
ECHDC1-221ENST00000531582 LIMD1Q9UGP4 676 aa7.03□□□□□ -1.28
ECHDC1-221ENST00000531582 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 LILRB3O75022 631 aa7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 TMEM259Q4ZIN3 620 aa7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 NUTM2DQ5VT03 806 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 NUTM2AQ8IVF1 878 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 IL21Q9HBE4 155 aa7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
ECHDC1-221ENST00000531582 C6orf229H3BNL8 230 aa7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 PUS10Q3MIT2 529 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 RETREG3Q86VR2 466 aa7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 SCUBE3Q8IX30 993 aa7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 SLC27A5Q9Y2P5 690 aa7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 CLSPNQ9HAW4 1339 aa7.01□□□□□ -1.29
ECHDC1-221ENST00000531582 FLIIQ13045 1269 aa7□□□□□ -1.29
ECHDC1-221ENST00000531582 BLOC1S3Q6QNY0 202 aa7□□□□□ -1.29
ECHDC1-221ENST00000531582 BANK1Q8NDB2 785 aa7□□□□□ -1.29
ECHDC1-221ENST00000531582 CSPP1Q1MSJ5 1256 aa6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 DESI1Q6ICB0 168 aa6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 BRICD5Q6PL45 260 aa6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 USB1Q9BQ65 265 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 PCDHGC3Q9UN70 934 aa6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
ECHDC1-221ENST00000531582 APBB1O00213 710 aa6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 ZPR1O75312 459 aa6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 RFC5P40937 340 aa6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 HELBQ8NG08 1087 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 MTRQ99707 1265 aa6.98□□□□□ -1.29
ECHDC1-221ENST00000531582 SOCS7O14512 581 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 COPS2P61201 443 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 PDE4CQ08493 712 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 TJAP1Q5JTD0 557 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 HLA-CQ95604 372 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 SPSB2Q99619 263 aa6.97□□□□□ -1.29
ECHDC1-221ENST00000531582 ITGBL1O95965 494 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 KCNC4Q03721 635 aa6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 QPCTQ16769 361 aa6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 MSS51Q4VC12 460 aa6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 TAF7LQ5H9L4 462 aa6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 THAP11Q96EK4 314 aa6.96□□□□□ -1.3
ECHDC1-221ENST00000531582 ADH1BP00325 375 aa6.95□□□□□ -1.3
ECHDC1-221ENST00000531582 RTL5Q5HYW3 569 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-221ENST00000531582 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
ECHDC1-221ENST00000531582 CABLES1Q8TDN4 633 aa6.95□□□□□ -1.3
ECHDC1-221ENST00000531582 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
ECHDC1-221ENST00000531582 AP1G2O75843 785 aa6.93□□□□□ -1.3
ECHDC1-221ENST00000531582 GGCXP38435 758 aa6.93□□□□□ -1.3
ECHDC1-221ENST00000531582 RNF19BQ6ZMZ0 732 aa6.93□□□□□ -1.3
ECHDC1-221ENST00000531582 NPM2Q86SE8 214 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-221ENST00000531582 JUNDP17535 347 aa6.92□□□□□ -1.3
ECHDC1-221ENST00000531582 IFFO2Q5TF58 517 aa6.92□□□□□ -1.3
ECHDC1-221ENST00000531582 PPARGC1BQ86YN6 1023 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-221ENST00000531582 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-221ENST00000531582 SLC6A16Q9GZN6 736 aa6.92□□□□□ -1.3
ECHDC1-221ENST00000531582 MMP16P51512 607 aa6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 NEUROD1Q13562 356 aa6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 GLIPR1L2Q4G1C9 344 aa6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 ZNF326Q5BKZ1 582 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 TSC1Q92574 1164 aa6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-221ENST00000531582 CFAP99D6REC4 459 aa6.9□□□□□ -1.3
ECHDC1-221ENST00000531582 PTPRNQ16849 979 aa6.9□□□□□ -1.3
ECHDC1-221ENST00000531582 LYPD8Q6UX82 237 aa6.9□□□□□ -1.3
ECHDC1-221ENST00000531582 ZNF516Q92618 1163 aa6.9□□□□□ -1.3
ECHDC1-221ENST00000531582 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-221ENST00000531582 USP17L8P0C7I0 530 aa6.89□□□□□ -1.31
ECHDC1-221ENST00000531582 FGD1P98174 961 aa6.89□□□□□ -1.31
ECHDC1-221ENST00000531582 FAM160A2Q8N612 972 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-221ENST00000531582 RAD21O60216 631 aa6.88□□□□□ -1.31
ECHDC1-221ENST00000531582 CTDSPL2Q05D32 466 aa6.88□□□□□ -1.31
ECHDC1-221ENST00000531582 TLL1O43897 1013 aa6.87□□□□□ -1.31
ECHDC1-221ENST00000531582 MCM6Q14566 821 aa6.87□□□□□ -1.31
ECHDC1-221ENST00000531582 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-221ENST00000531582 WWC1Q8IX03 1113 aa6.87□□□□□ -1.31
ECHDC1-221ENST00000531582 CCNYL3P0C7X3 344 aa6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 BRD2P25440 801 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 C14orf37Q86TY3 774 aa6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 ARMC2Q8NEN0 867 aa6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 NUDT12Q9BQG2 462 aa6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 EVA1BQ9NVM1 165 aa6.86□□□□□ -1.31
ECHDC1-221ENST00000531582 NKX2-3Q8TAU0 364 aa6.85□□□□□ -1.31
ECHDC1-221ENST00000531582 CCDC180Q9P1Z9 1646 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms