RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 IQGAP2Q13576 1575 aa12.02□□□□□ -0.49
SVIP-204ENST00000530199 RAPGEF3O95398 923 aa12.02□□□□□ -0.49
SVIP-204ENST00000530199 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
SVIP-204ENST00000530199 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
SVIP-204ENST00000530199 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
SVIP-204ENST00000530199 COL9A1P20849 921 aa12.01□□□□□ -0.49
SVIP-204ENST00000530199 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
SVIP-204ENST00000530199 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
SVIP-204ENST00000530199 MED1Q15648 1581 aaPredicted RBP12.01□□□□□ -0.49
SVIP-204ENST00000530199 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
SVIP-204ENST00000530199 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
SVIP-204ENST00000530199 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
SVIP-204ENST00000530199 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
SVIP-204ENST00000530199 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
SVIP-204ENST00000530199 HOMEZQ8IX15 550 aa11.99□□□□□ -0.49
SVIP-204ENST00000530199 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
SVIP-204ENST00000530199 NEO1Q92859 1461 aa11.98□□□□□ -0.49
SVIP-204ENST00000530199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
SVIP-204ENST00000530199 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
SVIP-204ENST00000530199 EYA1Q99502 592 aa11.97□□□□□ -0.49
SVIP-204ENST00000530199 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.49
SVIP-204ENST00000530199 FANCAO15360 1455 aa11.96□□□□□ -0.49
SVIP-204ENST00000530199 PTPREP23469 700 aa11.96□□□□□ -0.49
SVIP-204ENST00000530199 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
SVIP-204ENST00000530199 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
SVIP-204ENST00000530199 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
SVIP-204ENST00000530199 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
SVIP-204ENST00000530199 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
SVIP-204ENST00000530199 SNPHO15079 494 aa11.94□□□□□ -0.5
SVIP-204ENST00000530199 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
SVIP-204ENST00000530199 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
SVIP-204ENST00000530199 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
SVIP-204ENST00000530199 UBAP1LF5GYI3 381 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
SVIP-204ENST00000530199 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
SVIP-204ENST00000530199 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
SVIP-204ENST00000530199 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
SVIP-204ENST00000530199 NUDT18Q6ZVK8 323 aa11.91□□□□□ -0.5
SVIP-204ENST00000530199 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
SVIP-204ENST00000530199 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
SVIP-204ENST00000530199 ABCA8O94911 1581 aa11.91□□□□□ -0.5
SVIP-204ENST00000530199 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
SVIP-204ENST00000530199 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
SVIP-204ENST00000530199 SIGLEC1Q9BZZ2 1709 aa11.89□□□□□ -0.51
SVIP-204ENST00000530199 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
SVIP-204ENST00000530199 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
SVIP-204ENST00000530199 MCM6Q14566 821 aa11.89□□□□□ -0.51
SVIP-204ENST00000530199 TATDN2Q93075 761 aa11.89□□□□□ -0.51
SVIP-204ENST00000530199 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
SVIP-204ENST00000530199 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
SVIP-204ENST00000530199 DNAJB2P25686 324 aa11.88□□□□□ -0.51
SVIP-204ENST00000530199 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
SVIP-204ENST00000530199 CD46P15529 392 aa11.87□□□□□ -0.51
SVIP-204ENST00000530199 SULF1Q8IWU6 871 aa11.87□□□□□ -0.51
SVIP-204ENST00000530199 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
SVIP-204ENST00000530199 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 A6NJR5 290 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 HSPA1LP34931 641 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
SVIP-204ENST00000530199 DENND4BO75064 1496 aaPredicted RBP11.86□□□□□ -0.51
SVIP-204ENST00000530199 MAGI2Q86UL8 1455 aa11.85□□□□□ -0.51
SVIP-204ENST00000530199 UBTFP17480 764 aaKnown RBP11.85□□□□□ -0.51
SVIP-204ENST00000530199 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
SVIP-204ENST00000530199 DDX11L8A8MPP1 907 aa11.84□□□□□ -0.51
SVIP-204ENST00000530199 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
SVIP-204ENST00000530199 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
SVIP-204ENST00000530199 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
SVIP-204ENST00000530199 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
SVIP-204ENST00000530199 ZFYVE16Q7Z3T8 1539 aa11.83□□□□□ -0.52
SVIP-204ENST00000530199 CEBPAP49715 358 aaPredicted RBP11.83□□□□□ -0.52
SVIP-204ENST00000530199 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
SVIP-204ENST00000530199 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
SVIP-204ENST00000530199 MLECQ14165 292 aa11.82□□□□□ -0.52
SVIP-204ENST00000530199 SMAPO00193 183 aa11.81□□□□□ -0.52
SVIP-204ENST00000530199 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 APBB1O00213 710 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 RFC5P40937 340 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
SVIP-204ENST00000530199 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 NUTM1Q86Y26 1132 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 ATP10BO94823 1461 aa11.8□□□□□ -0.52
SVIP-204ENST00000530199 SPTLC1O15269 473 aa11.79□□□□□ -0.52
SVIP-204ENST00000530199 TRAK2O60296 914 aa11.79□□□□□ -0.52
SVIP-204ENST00000530199 BANK1Q8NDB2 785 aa11.79□□□□□ -0.52
SVIP-204ENST00000530199 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
SVIP-204ENST00000530199 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
SVIP-204ENST00000530199 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
SVIP-204ENST00000530199 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
SVIP-204ENST00000530199 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
SVIP-204ENST00000530199 GOLGA3Q08378 1498 aa11.77□□□□□ -0.52
SVIP-204ENST00000530199 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
SVIP-204ENST00000530199 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms