RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
CTNND1-225ENST00000530094 CPLX2Q6PUV4 134 aaKnown RBP10.4□□□□□ -0.74
CTNND1-225ENST00000530094 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
CTNND1-225ENST00000530094 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
CTNND1-225ENST00000530094 GOLGA6L1Q8N7Z2 621 aa10.4□□□□□ -0.75
CTNND1-225ENST00000530094 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.75
CTNND1-225ENST00000530094 ZKSCAN2Q63HK3 967 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 WDR7Q9Y4E6 1490 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 IDI1Q13907 227 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 H3BQV1 296 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 KIF7Q2M1P5 1343 aa10.39□□□□□ -0.75
CTNND1-225ENST00000530094 RTEL1-TNFRSF6BF6WH68 1400 aa10.38□□□□□ -0.75
CTNND1-225ENST00000530094 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
CTNND1-225ENST00000530094 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
CTNND1-225ENST00000530094 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
CTNND1-225ENST00000530094 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-225ENST00000530094 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-225ENST00000530094 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
CTNND1-225ENST00000530094 WAPLQ7Z5K2 1190 aa10.38□□□□□ -0.75
CTNND1-225ENST00000530094 API5Q9BZZ5 524 aaKnown RBP10.38□□□□□ -0.75
CTNND1-225ENST00000530094 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 APAF1O14727 1248 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 PRM3Q9NNZ6 103 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 A0A0U1RQG5 324 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-225ENST00000530094 RIPK4P57078 832 aa10.37□□□□□ -0.75
CTNND1-225ENST00000530094 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-225ENST00000530094 TPM1P09493 284 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 HSP90AB4PQ58FF6 505 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 PPP6R1Q9UPN7 881 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 NAIPQ13075 1403 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 TRIM29Q14134 588 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-225ENST00000530094 PLCH2O75038 1416 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
CTNND1-225ENST00000530094 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
CTNND1-225ENST00000530094 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
CTNND1-225ENST00000530094 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
CTNND1-225ENST00000530094 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
CTNND1-225ENST00000530094 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
CTNND1-225ENST00000530094 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
CTNND1-225ENST00000530094 MTHFSP49914 203 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 ZKSCAN1P17029 563 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 AAMPQ13685 434 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 REC8O95072 547 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
CTNND1-225ENST00000530094 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 ZC3H6P61129 1189 aaKnown RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-225ENST00000530094 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
CTNND1-225ENST00000530094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNND1-225ENST00000530094 RBM19Q9Y4C8 960 aaKnown RBP10.33□□□□□ -0.76
CTNND1-225ENST00000530094 TNRQ92752 1358 aa10.33□□□□□ -0.76
CTNND1-225ENST00000530094 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CTNND1-225ENST00000530094 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
CTNND1-225ENST00000530094 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 HSPA2P54652 639 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 TRDNQ13061 729 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
CTNND1-225ENST00000530094 UGGT2Q9NYU1 1516 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 NUP160Q12769 1436 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 G3BP1Q13283 466 aaKnown RBP eCLIP10.32□□□□□ -0.768e-9■□□□□ 11.1
CTNND1-225ENST00000530094 ANKRD45Q5TZF3 282 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 TSPYL4Q9UJ04 414 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 GNAI1P63096 354 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 DDX54Q8TDD1 881 aaKnown RBP10.32□□□□□ -0.76
CTNND1-225ENST00000530094 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 ERICH2A1L162 156 aa10.32□□□□□ -0.76
CTNND1-225ENST00000530094 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
CTNND1-225ENST00000530094 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
CTNND1-225ENST00000530094 GOLGA6L19H0YKK7 550 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 ADAMTS2O95450 1211 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
CTNND1-225ENST00000530094 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 FOXO3O43524 673 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 ADGRF5Q8IZF2 1346 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 ERC2O15083 957 aa10.31□□□□□ -0.76
CTNND1-225ENST00000530094 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-225ENST00000530094 SYCP2Q9BX26 1530 aa10.3□□□□□ -0.76
CTNND1-225ENST00000530094 KDM5BQ9UGL1 1544 aa10.3□□□□□ -0.76
CTNND1-225ENST00000530094 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms