RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 MBD5Q9P267 1494 aa11.59□□□□□ -0.55
CAPRIN1-206ENST00000528948 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
CAPRIN1-206ENST00000528948 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-206ENST00000528948 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
CAPRIN1-206ENST00000528948 KDM5CP41229 1560 aa11.58□□□□□ -0.55
CAPRIN1-206ENST00000528948 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 NGEFQ8N5V2 710 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
CAPRIN1-206ENST00000528948 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 USP47Q96K76 1375 aa11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 E9PCH4 1651 aa11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 DENND4BO75064 1496 aaPredicted RBP11.57□□□□□ -0.56
CAPRIN1-206ENST00000528948 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 C8orf34Q49A92 452 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 PCDHGA4Q9Y5G9 962 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
CAPRIN1-206ENST00000528948 EMP3P54852 163 aa11.55□□□□□ -0.56
CAPRIN1-206ENST00000528948 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 ESPNB1AK53 854 aa11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
CAPRIN1-206ENST00000528948 HS1BP3Q53T59 392 aa11.53□□□□□ -0.56
CAPRIN1-206ENST00000528948 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
CAPRIN1-206ENST00000528948 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
CAPRIN1-206ENST00000528948 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
CAPRIN1-206ENST00000528948 ANP32BQ92688 251 aaKnown RBP11.53□□□□□ -0.56
CAPRIN1-206ENST00000528948 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
CAPRIN1-206ENST00000528948 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
CAPRIN1-206ENST00000528948 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
CAPRIN1-206ENST00000528948 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
CAPRIN1-206ENST00000528948 CRBNQ96SW2 442 aa11.5□□□□□ -0.57
CAPRIN1-206ENST00000528948 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 CCDC173Q0VFZ6 552 aa11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 CHMP5Q9NZZ3 219 aa11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
CAPRIN1-206ENST00000528948 MCM4P33991 863 aa11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 UTP14CQ5TAP6 766 aaKnown RBP11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 POGKQ9P215 609 aa11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 CGNL1Q0VF96 1302 aa11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
CAPRIN1-206ENST00000528948 LAMC1P11047 1609 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 ERBB3P21860 1342 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 E2F4Q16254 413 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
CAPRIN1-206ENST00000528948 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 PSDA5PKW4 1024 aaPredicted RBP11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 NUDT7P0C024 238 aa11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 MCM5P33992 734 aa11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
CAPRIN1-206ENST00000528948 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
CAPRIN1-206ENST00000528948 OFD1O75665 1012 aa11.45□□□□□ -0.58
CAPRIN1-206ENST00000528948 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
CAPRIN1-206ENST00000528948 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
CAPRIN1-206ENST00000528948 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
CAPRIN1-206ENST00000528948 DAPK1P53355 1430 aa11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 ZSCAN30Q86W11 494 aa11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.588e-8■□□□□ 8.3
CAPRIN1-206ENST00000528948 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
CAPRIN1-206ENST00000528948 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
CAPRIN1-206ENST00000528948 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
CAPRIN1-206ENST00000528948 TRAK2O60296 914 aa11.42□□□□□ -0.58
CAPRIN1-206ENST00000528948 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
CAPRIN1-206ENST00000528948 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-206ENST00000528948 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
CAPRIN1-206ENST00000528948 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
CAPRIN1-206ENST00000528948 TBC1D32Q96NH3 1257 aa11.41□□□□□ -0.58
CAPRIN1-206ENST00000528948 PPP1R9BQ96SB3 815 aa11.41□□□□□ -0.58
CAPRIN1-206ENST00000528948 RRP7BPQ9NSQ0 103 aa11.41□□□□□ -0.58
CAPRIN1-206ENST00000528948 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 FGD1P98174 961 aa11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 PRDM4Q9UKN5 801 aa11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
CAPRIN1-206ENST00000528948 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 EVI5O60447 810 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms