RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	PTPRU	Q92729	1446 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	CLSPN	Q9HAW4	1339 aa		11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NKTR	P30414	1462 aa	Known RBP	11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	GABBR2	O75899	941 aa		11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	PIK3C2G	O75747	1445 aa		11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	ALK	Q9UM73	1620 aa		11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	PPL	O60437	1756 aa		11.17	□□□□□ -0.62
MS4A6A-208	ENST00000528851	C19orf44	Q9H6X5	657 aa		11.16	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NRXN3	Q9Y4C0	1643 aa		11.16	□□□□□ -0.62
MS4A6A-208	ENST00000528851	ILDR1	Q86SU0	546 aa	Predicted RBP	11.16	□□□□□ -0.62
MS4A6A-208	ENST00000528851	ABCC11	Q96J66	1382 aa		11.16	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NWD1	Q149M9	1564 aa		11.15	□□□□□ -0.62
MS4A6A-208	ENST00000528851	TMEM132E	Q6IEE7	984 aa		11.15	□□□□□ -0.62
MS4A6A-208	ENST00000528851	TIMELESS	Q9UNS1	1208 aa		11.15	□□□□□ -0.62
MS4A6A-208	ENST00000528851	CHD2	O14647	1828 aa	Known RBP	11.15	□□□□□ -0.62
MS4A6A-208	ENST00000528851	RBM33	Q96EV2	1170 aa	Known RBP	11.14	□□□□□ -0.63
MS4A6A-208	ENST00000528851	LRPPRC	P42704	1394 aa	Known RBP	11.14	□□□□□ -0.63
MS4A6A-208	ENST00000528851	C14orf37	Q86TY3	774 aa		11.14	□□□□□ -0.63
MS4A6A-208	ENST00000528851	STRCP1	A6NGW2	1772 aa		11.14	□□□□□ -0.63
MS4A6A-208	ENST00000528851	MSH6	P52701	1360 aa		11.13	□□□□□ -0.63
MS4A6A-208	ENST00000528851	CADPS2	Q86UW7	1296 aa		11.13	□□□□□ -0.63
MS4A6A-208	ENST00000528851	STK26	Q9P289	416 aa		11.13	□□□□□ -0.63
MS4A6A-208	ENST00000528851	IFT172	Q9UG01	1749 aa		11.13	□□□□□ -0.63
MS4A6A-208	ENST00000528851	PRAG1	Q86YV5	1406 aa		11.13	□□□□□ -0.63
MS4A6A-208	ENST00000528851	CLEC11A	Q9Y240	323 aa		11.12	□□□□□ -0.63
MS4A6A-208	ENST00000528851	ATF3	P18847	181 aa		11.12	□□□□□ -0.63
MS4A6A-208	ENST00000528851	SLAIN2	Q9P270	581 aa		11.12	□□□□□ -0.63
MS4A6A-208	ENST00000528851	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.11	□□□□□ -0.63
MS4A6A-208	ENST00000528851	TONSL	Q96HA7	1378 aa		11.11	□□□□□ -0.63
MS4A6A-208	ENST00000528851	TECPR2	O15040	1411 aa		11.11	□□□□□ -0.63
MS4A6A-208	ENST00000528851	PTCH1	Q13635	1447 aa		11.11	□□□□□ -0.63
MS4A6A-208	ENST00000528851	ROBO2	Q9HCK4	1378 aa		11.1	□□□□□ -0.63
MS4A6A-208	ENST00000528851	WAPL	Q7Z5K2	1190 aa		11.1	□□□□□ -0.63
MS4A6A-208	ENST00000528851	CCER1	Q8TC90	406 aa	Predicted RBP	11.1	□□□□□ -0.63
MS4A6A-208	ENST00000528851	FAM135B	Q49AJ0	1406 aa		11.1	□□□□□ -0.63
MS4A6A-208	ENST00000528851	PIP4K2B	P78356	416 aa		11.09	□□□□□ -0.63
MS4A6A-208	ENST00000528851	XRN1	Q8IZH2	1706 aa	Known RBP	11.08	□□□□□ -0.64
MS4A6A-208	ENST00000528851	NBPF1	Q3BBV0	1214 aa		11.08	□□□□□ -0.64
MS4A6A-208	ENST00000528851	POGK	Q9P215	609 aa		11.08	□□□□□ -0.64
MS4A6A-208	ENST00000528851	TRAK1	Q9UPV9	953 aa		11.08	□□□□□ -0.64
MS4A6A-208	ENST00000528851	SETD1A	O15047	1707 aa	Known RBP	11.08	□□□□□ -0.64
MS4A6A-208	ENST00000528851	DCC	P43146	1447 aa		11.07	□□□□□ -0.64
MS4A6A-208	ENST00000528851	LAMC1	P11047	1609 aa		11.07	□□□□□ -0.64
MS4A6A-208	ENST00000528851	PRAM1	Q96QH2	718 aa		11.07	□□□□□ -0.64
MS4A6A-208	ENST00000528851	NBPF8	Q3BBV2	869 aa		11.06	□□□□□ -0.64
MS4A6A-208	ENST00000528851	ADGRL3	Q9HAR2	1447 aa		11.06	□□□□□ -0.64
MS4A6A-208	ENST00000528851	ASXL1	Q8IXJ9	1541 aa		11.06	□□□□□ -0.64
MS4A6A-208	ENST00000528851	ADGRB1	O14514	1584 aa		11.06	□□□□□ -0.64
MS4A6A-208	ENST00000528851	CLCN6	P51797	869 aa		11.05	□□□□□ -0.64
MS4A6A-208	ENST00000528851	SSUH2	Q9Y2M2	353 aa		11.05	□□□□□ -0.64
MS4A6A-208	ENST00000528851	XIRP1	Q702N8	1843 aa	Known RBP	11.05	□□□□□ -0.64
MS4A6A-208	ENST00000528851	DLC1	Q96QB1	1528 aa		11.05	□□□□□ -0.64
MS4A6A-208	ENST00000528851	PLEKHH1	Q9ULM0	1364 aa		11.03	□□□□□ -0.64
MS4A6A-208	ENST00000528851	KIAA1210	Q9ULL0	1709 aa		11.02	□□□□□ -0.65
MS4A6A-208	ENST00000528851	HSPA1L	P34931	641 aa		11.02	□□□□□ -0.65
MS4A6A-208	ENST00000528851	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
MS4A6A-208	ENST00000528851	ROCK2	O75116	1388 aa	Known RBP	11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	BRINP3	Q76B58	766 aa		11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	ZNF692	Q9BU19	519 aa	Predicted RBP	11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	CARD11	Q9BXL7	1154 aa		11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	MST1R	Q04912	1400 aa		11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	GPRASP1	Q5JY77	1395 aa		11.01	□□□□□ -0.65
MS4A6A-208	ENST00000528851	KNDC1	Q76NI1	1749 aa		11	□□□□□ -0.65
MS4A6A-208	ENST00000528851	WASL	O00401	505 aa	Predicted RBP	11	□□□□□ -0.65
MS4A6A-208	ENST00000528851	CENPJ	Q9HC77	1338 aa	Predicted RBP	11	□□□□□ -0.65
MS4A6A-208	ENST00000528851	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.99	□□□□□ -0.65
MS4A6A-208	ENST00000528851	C1orf167	Q5SNV9	1468 aa		10.99	□□□□□ -0.65
MS4A6A-208	ENST00000528851	SLC24A1	O60721	1099 aa		10.99	□□□□□ -0.65
MS4A6A-208	ENST00000528851	ESCO1	Q5FWF5	840 aa		10.99	□□□□□ -0.65
MS4A6A-208	ENST00000528851	ORAI2	Q96SN7	254 aa		10.99	□□□□□ -0.65
MS4A6A-208	ENST00000528851	EIF3A	Q14152	1382 aa	Known RBP	10.97	□□□□□ -0.65
MS4A6A-208	ENST00000528851	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.97	□□□□□ -0.65
MS4A6A-208	ENST00000528851	CDK19	Q9BWU1	502 aa		10.97	□□□□□ -0.65
MS4A6A-208	ENST00000528851	NUTM2F	A1L443	756 aa		10.96	□□□□□ -0.65
MS4A6A-208	ENST00000528851	LRRC59	Q96AG4	307 aa	Known RBP	10.96	□□□□□ -0.65
MS4A6A-208	ENST00000528851	CDC42BPG	Q6DT37	1551 aa		10.96	□□□□□ -0.65
MS4A6A-208	ENST00000528851	RALGAPB	Q86X10	1494 aa		10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	TRPM1	Q7Z4N2	1603 aa		10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	NUDT16	Q96DE0	195 aa	Known RBP	10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PHF8	Q9UPP1	1060 aa		10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	NALCN	Q8IZF0	1738 aa		10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	ANKAR	Q7Z5J8	1434 aa		10.95	□□□□□ -0.66
MS4A6A-208	ENST00000528851	FOXO3	O43524	673 aa		10.94	□□□□□ -0.66
MS4A6A-208	ENST00000528851	CCDC61	Q9Y6R9	512 aa		10.94	□□□□□ -0.66
MS4A6A-208	ENST00000528851	SOS2	Q07890	1332 aa	Predicted RBP	10.94	□□□□□ -0.66
MS4A6A-208	ENST00000528851	NPHP3	Q7Z494	1330 aa		10.94	□□□□□ -0.66
MS4A6A-208	ENST00000528851	EVC2	Q86UK5	1308 aa		10.94	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PRR29	P0C7W0	189 aa		10.93	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PUS7	Q96PZ0	661 aa	Known RBP	10.93	□□□□□ -0.66
MS4A6A-208	ENST00000528851	ROBO1	Q9Y6N7	1651 aa		10.93	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PSME1	Q06323	249 aa		10.93	□□□□□ -0.66
MS4A6A-208	ENST00000528851	SBNO2	Q9Y2G9	1366 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PLEKHG3	A1L390	1219 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	SRPK2	P78362	688 aa	Known RBP	10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	KRT28	Q7Z3Y7	464 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	PRR36	Q9H6K5	1346 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	JCAD	Q9P266	1359 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	ADGRB2	O60241	1585 aa		10.92	□□□□□ -0.66
MS4A6A-208	ENST00000528851	ST20-MTHFS	A0A0A6YYL1	179 aa		10.91	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms