RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 SPSB2Q99619 263 aa14.36□□□□□ -0.11
COMMD9-205ENST00000528608 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
COMMD9-205ENST00000528608 CD46P15529 392 aa14.35□□□□□ -0.11
COMMD9-205ENST00000528608 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
COMMD9-205ENST00000528608 IFT140Q96RY7 1462 aa14.35□□□□□ -0.11
COMMD9-205ENST00000528608 PPEF1O14829 653 aaPredicted RBP14.34□□□□□ -0.11
COMMD9-205ENST00000528608 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
COMMD9-205ENST00000528608 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
COMMD9-205ENST00000528608 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
COMMD9-205ENST00000528608 SLC27A5Q9Y2P5 690 aa14.33□□□□□ -0.12
COMMD9-205ENST00000528608 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
COMMD9-205ENST00000528608 CLCN1P35523 988 aa14.32□□□□□ -0.12
COMMD9-205ENST00000528608 LAPTM4AQ15012 233 aa14.32□□□□□ -0.12
COMMD9-205ENST00000528608 GPCPD1Q9NPB8 672 aa14.32□□□□□ -0.12
COMMD9-205ENST00000528608 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
COMMD9-205ENST00000528608 GFRA3O60609 400 aa14.31□□□□□ -0.12
COMMD9-205ENST00000528608 FMNL1O95466 1100 aaPredicted RBP14.31□□□□□ -0.12
COMMD9-205ENST00000528608 Q6ZNB5 142 aa14.31□□□□□ -0.12
COMMD9-205ENST00000528608 ZC3H15Q8WU90 426 aaKnown RBP14.31□□□□□ -0.12
COMMD9-205ENST00000528608 SLC19A1P41440 591 aa14.3□□□□□ -0.12
COMMD9-205ENST00000528608 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
COMMD9-205ENST00000528608 SOGA1O94964 1423 aa14.3□□□□□ -0.12
COMMD9-205ENST00000528608 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
COMMD9-205ENST00000528608 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
COMMD9-205ENST00000528608 KDM4AO75164 1064 aa14.28□□□□□ -0.12
COMMD9-205ENST00000528608 ZMYND10O75800 440 aa14.28□□□□□ -0.12
COMMD9-205ENST00000528608 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
COMMD9-205ENST00000528608 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
COMMD9-205ENST00000528608 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
COMMD9-205ENST00000528608 EMID1Q96A84 441 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-205ENST00000528608 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
COMMD9-205ENST00000528608 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
COMMD9-205ENST00000528608 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
COMMD9-205ENST00000528608 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
COMMD9-205ENST00000528608 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
COMMD9-205ENST00000528608 NRG2O14511 850 aaPredicted RBP14.23□□□□□ -0.13
COMMD9-205ENST00000528608 USP46P62068 366 aa14.23□□□□□ -0.13
COMMD9-205ENST00000528608 Q3C1V9 767 aa14.23□□□□□ -0.13
COMMD9-205ENST00000528608 BRICD5Q6PL45 260 aa14.23□□□□□ -0.13
COMMD9-205ENST00000528608 RNF19BQ6ZMZ0 732 aa14.23□□□□□ -0.13
COMMD9-205ENST00000528608 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
COMMD9-205ENST00000528608 TTLL12Q14166 644 aaPredicted RBP14.22□□□□□ -0.13
COMMD9-205ENST00000528608 SPRYD7Q5W111 196 aa14.22□□□□□ -0.13
COMMD9-205ENST00000528608 LIAT1Q6ZQX7 453 aa14.22□□□□□ -0.13
COMMD9-205ENST00000528608 FAM160A2Q8N612 972 aaPredicted RBP14.21□□□□□ -0.13
COMMD9-205ENST00000528608 PLA2G2CQ5R387 149 aa14.2□□□□□ -0.14
COMMD9-205ENST00000528608 PRDM9Q9NQV7 894 aa14.2□□□□□ -0.14
COMMD9-205ENST00000528608 FCF1Q9Y324 198 aaKnown RBP14.2□□□□□ -0.14
COMMD9-205ENST00000528608 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
COMMD9-205ENST00000528608 NUTM1Q86Y26 1132 aa14.19□□□□□ -0.14
COMMD9-205ENST00000528608 REPIN1Q9BWE0 567 aaKnown RBP14.19□□□□□ -0.14
COMMD9-205ENST00000528608 HOXA2O43364 376 aa14.18□□□□□ -0.14
COMMD9-205ENST00000528608 MSS51Q4VC12 460 aa14.18□□□□□ -0.14
COMMD9-205ENST00000528608 ZNF598Q86UK7 904 aaKnown RBP14.18□□□□□ -0.14
COMMD9-205ENST00000528608 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
COMMD9-205ENST00000528608 ZNF697Q5TEC3 545 aa14.17□□□□□ -0.14
COMMD9-205ENST00000528608 HLA-CQ95604 372 aa14.17□□□□□ -0.14
COMMD9-205ENST00000528608 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
COMMD9-205ENST00000528608 AMHR2Q16671 573 aa14.16□□□□□ -0.14
COMMD9-205ENST00000528608 GUCA2AQ02747 115 aa14.13□□□□□ -0.15
COMMD9-205ENST00000528608 USB1Q9BQ65 265 aaKnown RBP14.13□□□□□ -0.15
COMMD9-205ENST00000528608 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
COMMD9-205ENST00000528608 GIGYF2Q6Y7W6 1299 aaKnown RBP14.12□□□□□ -0.15
COMMD9-205ENST00000528608 TRIM67Q6ZTA4 783 aa14.12□□□□□ -0.15
COMMD9-205ENST00000528608 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
COMMD9-205ENST00000528608 RPIAP49247 311 aa14.1□□□□□ -0.15
COMMD9-205ENST00000528608 TRAF7Q6Q0C0 670 aa14.1□□□□□ -0.15
COMMD9-205ENST00000528608 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
COMMD9-205ENST00000528608 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
COMMD9-205ENST00000528608 AK7Q96M32 723 aa14.09□□□□□ -0.15
COMMD9-205ENST00000528608 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 TNFRSF10AO00220 468 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 PRR20EP86478 221 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 PRR20CP86479 221 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 PRR20DP86480 221 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 PRR20BP86481 221 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 PRR20AP86496 221 aa14.08□□□□□ -0.16
COMMD9-205ENST00000528608 TRIM66O15016 1216 aa14.07□□□□□ -0.16
COMMD9-205ENST00000528608 MMP16P51512 607 aa14.07□□□□□ -0.16
COMMD9-205ENST00000528608 ZBTB24O43167 697 aaPredicted RBP14.06□□□□□ -0.16
COMMD9-205ENST00000528608 PARP9Q8IXQ6 854 aa14.06□□□□□ -0.16
COMMD9-205ENST00000528608 CHD1O14646 1710 aa14.06□□□□□ -0.16
COMMD9-205ENST00000528608 LCE2BO14633 110 aa14.05□□□□□ -0.16
COMMD9-205ENST00000528608 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
COMMD9-205ENST00000528608 FDX1P10109 184 aa14.05□□□□□ -0.16
COMMD9-205ENST00000528608 SPIRE2Q8WWL2 714 aa14.05□□□□□ -0.16
COMMD9-205ENST00000528608 GDF9O60383 454 aa14.04□□□□□ -0.16
COMMD9-205ENST00000528608 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
COMMD9-205ENST00000528608 FOXC1Q12948 553 aa14.04□□□□□ -0.16
COMMD9-205ENST00000528608 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
COMMD9-205ENST00000528608 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
COMMD9-205ENST00000528608 SYMPKQ92797 1274 aaKnown RBP14.03□□□□□ -0.16
COMMD9-205ENST00000528608 PKDCCQ504Y2 493 aa14.02□□□□□ -0.17
COMMD9-205ENST00000528608 RETREG3Q86VR2 466 aa14.01□□□□□ -0.17
COMMD9-205ENST00000528608 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
COMMD9-205ENST00000528608 SYNJ2O15056 1496 aa14□□□□□ -0.17
COMMD9-205ENST00000528608 C6orf229H3BNL8 230 aa14□□□□□ -0.17
COMMD9-205ENST00000528608 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
COMMD9-205ENST00000528608 FAM187AA6NFU0 413 aa13.99□□□□□ -0.17
COMMD9-205ENST00000528608 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms