RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
RDX-205ENST00000528556 LAMC1P11047 1609 aa11.81□□□□□ -0.52
RDX-205ENST00000528556 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
RDX-205ENST00000528556 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
RDX-205ENST00000528556 TRAK1Q9UPV9 953 aa11.8□□□□□ -0.52
RDX-205ENST00000528556 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
RDX-205ENST00000528556 USP47Q96K76 1375 aa11.79□□□□□ -0.52
RDX-205ENST00000528556 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
RDX-205ENST00000528556 POGKQ9P215 609 aa11.79□□□□□ -0.52
RDX-205ENST00000528556 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
RDX-205ENST00000528556 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
RDX-205ENST00000528556 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
RDX-205ENST00000528556 TBX22Q9Y458 520 aa11.77□□□□□ -0.53
RDX-205ENST00000528556 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
RDX-205ENST00000528556 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
RDX-205ENST00000528556 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
RDX-205ENST00000528556 SETBP1Q9Y6X0 1596 aa11.76□□□□□ -0.53
RDX-205ENST00000528556 ST20-MTHFSA0A0A6YYL1 179 aa11.76□□□□□ -0.53
RDX-205ENST00000528556 GPRASP1Q5JY77 1395 aa11.76□□□□□ -0.53
RDX-205ENST00000528556 GABBR2O75899 941 aa11.75□□□□□ -0.53
RDX-205ENST00000528556 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
RDX-205ENST00000528556 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
RDX-205ENST00000528556 AMOTL2Q9Y2J4 779 aa11.74□□□□□ -0.53
RDX-205ENST00000528556 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
RDX-205ENST00000528556 METP08581 1390 aa11.74□□□□□ -0.53
RDX-205ENST00000528556 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
RDX-205ENST00000528556 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
RDX-205ENST00000528556 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
RDX-205ENST00000528556 LRPPRCP42704 1394 aaKnown RBP11.72□□□□□ -0.53
RDX-205ENST00000528556 TMF1P82094 1093 aa11.72□□□□□ -0.53
RDX-205ENST00000528556 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
RDX-205ENST00000528556 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
RDX-205ENST00000528556 NRXN3Q9Y4C0 1643 aa11.71□□□□□ -0.53
RDX-205ENST00000528556 MED14O60244 1454 aa11.71□□□□□ -0.53
RDX-205ENST00000528556 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
RDX-205ENST00000528556 ADGRB1O14514 1584 aa11.71□□□□□ -0.54
RDX-205ENST00000528556 PIK3R4Q99570 1358 aa11.7□□□□□ -0.54
RDX-205ENST00000528556 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
RDX-205ENST00000528556 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
RDX-205ENST00000528556 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
RDX-205ENST00000528556 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
RDX-205ENST00000528556 KCNA6P17658 529 aa11.68□□□□□ -0.54
RDX-205ENST00000528556 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
RDX-205ENST00000528556 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
RDX-205ENST00000528556 EVC2Q86UK5 1308 aa11.67□□□□□ -0.54
RDX-205ENST00000528556 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
RDX-205ENST00000528556 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
RDX-205ENST00000528556 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
RDX-205ENST00000528556 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
RDX-205ENST00000528556 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
RDX-205ENST00000528556 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
RDX-205ENST00000528556 QRICH2Q9H0J4 1663 aa11.65□□□□□ -0.54
RDX-205ENST00000528556 FAM135BQ49AJ0 1406 aa11.65□□□□□ -0.54
RDX-205ENST00000528556 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
RDX-205ENST00000528556 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
RDX-205ENST00000528556 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
RDX-205ENST00000528556 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
RDX-205ENST00000528556 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
RDX-205ENST00000528556 TECPR2O15040 1411 aa11.63□□□□□ -0.55
RDX-205ENST00000528556 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
RDX-205ENST00000528556 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
RDX-205ENST00000528556 TESK2Q96S53 571 aa11.63□□□□□ -0.55
RDX-205ENST00000528556 CPS1P31327 1500 aa11.63□□□□□ -0.55
RDX-205ENST00000528556 CCDC7Q96M83 1385 aa11.63□□□□□ -0.55
RDX-205ENST00000528556 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
RDX-205ENST00000528556 KIF7Q2M1P5 1343 aa11.62□□□□□ -0.55
RDX-205ENST00000528556 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
RDX-205ENST00000528556 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
RDX-205ENST00000528556 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
RDX-205ENST00000528556 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
RDX-205ENST00000528556 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
RDX-205ENST00000528556 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
RDX-205ENST00000528556 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
RDX-205ENST00000528556 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
RDX-205ENST00000528556 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
RDX-205ENST00000528556 SBNO2Q9Y2G9 1366 aa11.61□□□□□ -0.55
RDX-205ENST00000528556 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
RDX-205ENST00000528556 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
RDX-205ENST00000528556 WASLO00401 505 aaPredicted RBP11.6□□□□□ -0.55
RDX-205ENST00000528556 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
RDX-205ENST00000528556 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
RDX-205ENST00000528556 ATF3P18847 181 aa11.59□□□□□ -0.55
RDX-205ENST00000528556 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
RDX-205ENST00000528556 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
RDX-205ENST00000528556 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
RDX-205ENST00000528556 MSH6P52701 1360 aa11.57□□□□□ -0.56
RDX-205ENST00000528556 TMEM94Q12767 1356 aa11.57□□□□□ -0.56
RDX-205ENST00000528556 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
RDX-205ENST00000528556 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
RDX-205ENST00000528556 LHX8Q68G74 356 aa11.57□□□□□ -0.56
RDX-205ENST00000528556 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
RDX-205ENST00000528556 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
RDX-205ENST00000528556 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
RDX-205ENST00000528556 PUS7Q96PZ0 661 aaKnown RBP11.56□□□□□ -0.56
RDX-205ENST00000528556 C19orf44Q9H6X5 657 aa11.56□□□□□ -0.56
RDX-205ENST00000528556 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
RDX-205ENST00000528556 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
RDX-205ENST00000528556 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
RDX-205ENST00000528556 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
RDX-205ENST00000528556 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms