RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 DCCP43146 1447 aa15.1■□□□□ 0.01
CAPN1-210ENST00000527699 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-210ENST00000527699 SEPT12Q8IYM1 358 aa15.08■□□□□ 0
CAPN1-210ENST00000527699 RALGAPBQ86X10 1494 aa15.08■□□□□ 0
CAPN1-210ENST00000527699 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
CAPN1-210ENST00000527699 A0A0G2JS52 829 aa15.07■□□□□ 0
CAPN1-210ENST00000527699 MYT1Q01538 1121 aa15.07■□□□□ 0
CAPN1-210ENST00000527699 TRPM2O94759 1503 aa15.07■□□□□ 0
CAPN1-210ENST00000527699 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
CAPN1-210ENST00000527699 GLI3P10071 1580 aa15.06■□□□□ 0
CAPN1-210ENST00000527699 METP08581 1390 aa15.05■□□□□ -0
CAPN1-210ENST00000527699 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
CAPN1-210ENST00000527699 UNC5CLQ8IV45 518 aa15.03■□□□□ -0
CAPN1-210ENST00000527699 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
CAPN1-210ENST00000527699 PIK3R4Q99570 1358 aa15.02■□□□□ -0
CAPN1-210ENST00000527699 CAMTA1Q9Y6Y1 1673 aa15.02□□□□□ -0.01
CAPN1-210ENST00000527699 NRXN3Q9Y4C0 1643 aa15.02□□□□□ -0.01
CAPN1-210ENST00000527699 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
CAPN1-210ENST00000527699 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
CAPN1-210ENST00000527699 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-210ENST00000527699 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-210ENST00000527699 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
CAPN1-210ENST00000527699 RGPD1P0DJD0 1748 aa14.97□□□□□ -0.01
CAPN1-210ENST00000527699 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
CAPN1-210ENST00000527699 MYOM2P54296 1465 aa14.97□□□□□ -0.01
CAPN1-210ENST00000527699 EZH2Q15910 746 aaKnown RBP14.97□□□□□ -0.01
CAPN1-210ENST00000527699 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
CAPN1-210ENST00000527699 NEXMIFQ5QGS0 1516 aa14.96□□□□□ -0.02
CAPN1-210ENST00000527699 C1orf167Q5SNV9 1468 aa14.95□□□□□ -0.02
CAPN1-210ENST00000527699 SPON1Q9HCB6 807 aa14.95□□□□□ -0.02
CAPN1-210ENST00000527699 NAIPQ13075 1403 aa14.94□□□□□ -0.02
CAPN1-210ENST00000527699 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
CAPN1-210ENST00000527699 CEP350Q5VT06 3117 aa14.94□□□□□ -0.02
CAPN1-210ENST00000527699 GIGYF1O75420 1035 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-210ENST00000527699 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
CAPN1-210ENST00000527699 LAMC1P11047 1609 aa14.92□□□□□ -0.02
CAPN1-210ENST00000527699 NALCNQ8IZF0 1738 aa14.92□□□□□ -0.02
CAPN1-210ENST00000527699 FAM182BQ5T319 152 aa14.92□□□□□ -0.02
CAPN1-210ENST00000527699 ROBO2Q9HCK4 1378 aa14.92□□□□□ -0.02
CAPN1-210ENST00000527699 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
CAPN1-210ENST00000527699 CHD4Q14839 1912 aa14.91□□□□□ -0.02
CAPN1-210ENST00000527699 SLIT2O94813 1529 aa14.91□□□□□ -0.02
CAPN1-210ENST00000527699 KIF1BO60333 1816 aa14.9□□□□□ -0.02
CAPN1-210ENST00000527699 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-210ENST00000527699 KCNQ2O43526 872 aa14.9□□□□□ -0.02
CAPN1-210ENST00000527699 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-210ENST00000527699 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-210ENST00000527699 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
CAPN1-210ENST00000527699 STK26Q9P289 416 aa14.9□□□□□ -0.02
CAPN1-210ENST00000527699 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
CAPN1-210ENST00000527699 VPS72Q15906 364 aa14.89□□□□□ -0.03
CAPN1-210ENST00000527699 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
CAPN1-210ENST00000527699 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
CAPN1-210ENST00000527699 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
CAPN1-210ENST00000527699 ONECUT3O60422 494 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-210ENST00000527699 FAM98CQ17RN3 349 aaKnown RBP14.86□□□□□ -0.03
CAPN1-210ENST00000527699 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
CAPN1-210ENST00000527699 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
CAPN1-210ENST00000527699 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
CAPN1-210ENST00000527699 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
CAPN1-210ENST00000527699 TNS1Q9HBL0 1735 aaKnown RBP14.86□□□□□ -0.03
CAPN1-210ENST00000527699 ADGRB2O60241 1585 aa14.85□□□□□ -0.03
CAPN1-210ENST00000527699 DISP2A7MBM2 1401 aa14.85□□□□□ -0.03
CAPN1-210ENST00000527699 CAPN15O75808 1086 aa14.85□□□□□ -0.03
CAPN1-210ENST00000527699 CAMKK2Q96RR4 588 aa14.85□□□□□ -0.03
CAPN1-210ENST00000527699 APBA3O96018 575 aa14.84□□□□□ -0.03
CAPN1-210ENST00000527699 TMEM132EQ6IEE7 984 aa14.84□□□□□ -0.03
CAPN1-210ENST00000527699 TRIM37O94972 964 aa14.83□□□□□ -0.04
CAPN1-210ENST00000527699 HFM1A2PYH4 1435 aa14.83□□□□□ -0.04
CAPN1-210ENST00000527699 RPGRIP1LQ68CZ1 1315 aa14.82□□□□□ -0.04
CAPN1-210ENST00000527699 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
CAPN1-210ENST00000527699 PLCH1Q4KWH8 1693 aa14.81□□□□□ -0.04
CAPN1-210ENST00000527699 FOXO3O43524 673 aa14.81□□□□□ -0.04
CAPN1-210ENST00000527699 UTRNP46939 3433 aa14.8□□□□□ -0.04
CAPN1-210ENST00000527699 PPLO60437 1756 aa14.8□□□□□ -0.04
CAPN1-210ENST00000527699 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
CAPN1-210ENST00000527699 PXDNQ92626 1479 aa14.79□□□□□ -0.04
CAPN1-210ENST00000527699 NUP188Q5SRE5 1749 aa14.78□□□□□ -0.04
CAPN1-210ENST00000527699 PARD3Q8TEW0 1356 aa14.78□□□□□ -0.04
CAPN1-210ENST00000527699 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
CAPN1-210ENST00000527699 NWD2Q9ULI1 1742 aa14.78□□□□□ -0.04
CAPN1-210ENST00000527699 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
CAPN1-210ENST00000527699 CCDC144AA2RUR9 1427 aa14.77□□□□□ -0.04
CAPN1-210ENST00000527699 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.05
CAPN1-210ENST00000527699 RREB1Q92766 1687 aa14.76□□□□□ -0.05
CAPN1-210ENST00000527699 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
CAPN1-210ENST00000527699 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
CAPN1-210ENST00000527699 MYOM1P52179 1685 aa14.72□□□□□ -0.05
CAPN1-210ENST00000527699 CFAP70Q5T0N1 1121 aa14.72□□□□□ -0.05
CAPN1-210ENST00000527699 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
CAPN1-210ENST00000527699 FAM196AQ6ZSG2 479 aa14.72□□□□□ -0.05
CAPN1-210ENST00000527699 ZBTB7AO95365 584 aa14.71□□□□□ -0.05
CAPN1-210ENST00000527699 KRT28Q7Z3Y7 464 aa14.71□□□□□ -0.05
CAPN1-210ENST00000527699 FHDC1Q9C0D6 1143 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-210ENST00000527699 SPATA31E1Q6ZUB1 1445 aa14.71□□□□□ -0.05
CAPN1-210ENST00000527699 CDC42BPGQ6DT37 1551 aa14.71□□□□□ -0.05
CAPN1-210ENST00000527699 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
CAPN1-210ENST00000527699 FAM83GA6ND36 823 aa14.7□□□□□ -0.06
CAPN1-210ENST00000527699 SYT17Q9BSW7 474 aa14.7□□□□□ -0.06
CAPN1-210ENST00000527699 PRAG1Q86YV5 1406 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms