RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
LINC01001-202ENST00000527683 CDK13Q14004 1512 aaKnown RBP9.16□□□□□ -0.94
LINC01001-202ENST00000527683 ZMYM4Q5VZL5 1548 aa9.16□□□□□ -0.94
LINC01001-202ENST00000527683 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
LINC01001-202ENST00000527683 HECW1Q76N89 1606 aa9.16□□□□□ -0.94
LINC01001-202ENST00000527683 PPP1R3GB7ZBB8 358 aa9.15□□□□□ -0.94
LINC01001-202ENST00000527683 SEMA3EO15041 775 aa9.15□□□□□ -0.94
LINC01001-202ENST00000527683 CDHR5Q9HBB8 845 aa9.15□□□□□ -0.94
LINC01001-202ENST00000527683 EFCAB5A4FU69 1503 aa9.15□□□□□ -0.95
LINC01001-202ENST00000527683 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 RNF166Q96A37 237 aaPredicted RBP9.14□□□□□ -0.95
LINC01001-202ENST00000527683 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 TTC37Q6PGP7 1564 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 ARHGEF12Q9NZN5 1544 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
LINC01001-202ENST00000527683 TROQ12816 1431 aaPredicted RBP9.14□□□□□ -0.95
LINC01001-202ENST00000527683 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
LINC01001-202ENST00000527683 SOCS7O14512 581 aa9.13□□□□□ -0.95
LINC01001-202ENST00000527683 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
LINC01001-202ENST00000527683 ARHGAP35Q9NRY4 1499 aa9.13□□□□□ -0.95
LINC01001-202ENST00000527683 DISP3Q9P2K9 1392 aa9.12□□□□□ -0.95
LINC01001-202ENST00000527683 SIGLEC1Q9BZZ2 1709 aa9.12□□□□□ -0.95
LINC01001-202ENST00000527683 NPDC1Q9NQX5 325 aaPredicted RBP9.12□□□□□ -0.95
LINC01001-202ENST00000527683 TRAPPC8Q9Y2L5 1435 aa9.12□□□□□ -0.95
LINC01001-202ENST00000527683 MAP3K7O43318 606 aa9.11□□□□□ -0.95
LINC01001-202ENST00000527683 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
LINC01001-202ENST00000527683 UHRF1BP1Q6BDS2 1440 aa9.11□□□□□ -0.95
LINC01001-202ENST00000527683 ZNF518AQ6AHZ1 1483 aa9.1□□□□□ -0.95
LINC01001-202ENST00000527683 MLH3Q9UHC1 1453 aa9.1□□□□□ -0.95
LINC01001-202ENST00000527683 HNRNPMP52272 730 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC01001-202ENST00000527683 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
LINC01001-202ENST00000527683 PTPRTO14522 1441 aa9.1□□□□□ -0.95
LINC01001-202ENST00000527683 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
LINC01001-202ENST00000527683 ZMYM3Q14202 1370 aa9.09□□□□□ -0.95
LINC01001-202ENST00000527683 CFAP74Q9C0B2 1584 aa9.08□□□□□ -0.96
LINC01001-202ENST00000527683 CLIP1P30622 1438 aa9.08□□□□□ -0.96
LINC01001-202ENST00000527683 KIAA1468Q9P260 1216 aa9.08□□□□□ -0.96
LINC01001-202ENST00000527683 ARHGAP5Q13017 1502 aa9.07□□□□□ -0.96
LINC01001-202ENST00000527683 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
LINC01001-202ENST00000527683 CEP162Q5TB80 1403 aa9.06□□□□□ -0.96
LINC01001-202ENST00000527683 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
LINC01001-202ENST00000527683 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
LINC01001-202ENST00000527683 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
LINC01001-202ENST00000527683 KDM5CP41229 1560 aa9.05□□□□□ -0.96
LINC01001-202ENST00000527683 GGT6Q6P531 493 aa9.05□□□□□ -0.96
LINC01001-202ENST00000527683 CFDP1Q9UEE9 299 aaPredicted RBP9.05□□□□□ -0.96
LINC01001-202ENST00000527683 AGLP35573 1532 aa9.05□□□□□ -0.96
LINC01001-202ENST00000527683 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
LINC01001-202ENST00000527683 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
LINC01001-202ENST00000527683 SETD1BQ9UPS6 1966 aaKnown RBP9.04□□□□□ -0.96
LINC01001-202ENST00000527683 NCOA1Q15788 1441 aa9.04□□□□□ -0.96
LINC01001-202ENST00000527683 CASKIN1Q8WXD9 1431 aa9.04□□□□□ -0.96
LINC01001-202ENST00000527683 CNTLNQ9NXG0 1405 aa9.04□□□□□ -0.96
LINC01001-202ENST00000527683 KIF14Q15058 1648 aa9.03□□□□□ -0.96
LINC01001-202ENST00000527683 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
LINC01001-202ENST00000527683 PRSS12P56730 875 aa9.03□□□□□ -0.96
LINC01001-202ENST00000527683 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
LINC01001-202ENST00000527683 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
LINC01001-202ENST00000527683 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
LINC01001-202ENST00000527683 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
LINC01001-202ENST00000527683 STRCQ7RTU9 1775 aa9.02□□□□□ -0.97
LINC01001-202ENST00000527683 GPATCH8Q9UKJ3 1502 aaKnown RBP9.02□□□□□ -0.97
LINC01001-202ENST00000527683 SMAPO00193 183 aa9.02□□□□□ -0.97
LINC01001-202ENST00000527683 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
LINC01001-202ENST00000527683 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
LINC01001-202ENST00000527683 NPATQ14207 1427 aa9.02□□□□□ -0.97
LINC01001-202ENST00000527683 DIP2CQ9Y2E4 1556 aa9.02□□□□□ -0.97
LINC01001-202ENST00000527683 ZNF644Q9H582 1327 aaPredicted RBP9.02□□□□□ -0.97
LINC01001-202ENST00000527683 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
LINC01001-202ENST00000527683 KIAA1107Q9UPP5 1409 aa9.01□□□□□ -0.97
LINC01001-202ENST00000527683 FER1L4A9Z1Z3 1794 aa9□□□□□ -0.97
LINC01001-202ENST00000527683 PTGDRQ13258 359 aa9□□□□□ -0.97
LINC01001-202ENST00000527683 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
LINC01001-202ENST00000527683 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
LINC01001-202ENST00000527683 PTPRKQ15262 1439 aa8.99□□□□□ -0.97
LINC01001-202ENST00000527683 IQSEC2Q5JU85 1478 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 GPR37O15354 613 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 ABCC1P33527 1531 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 CCNB3Q8WWL7 1395 aa8.98□□□□□ -0.97
LINC01001-202ENST00000527683 PREX1Q8TCU6 1659 aa8.97□□□□□ -0.97
LINC01001-202ENST00000527683 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
LINC01001-202ENST00000527683 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
LINC01001-202ENST00000527683 MYO5CQ9NQX4 1742 aa8.97□□□□□ -0.97
LINC01001-202ENST00000527683 A2MP01023 1474 aa8.96□□□□□ -0.97
LINC01001-202ENST00000527683 SAMD9LQ8IVG5 1584 aa8.96□□□□□ -0.97
LINC01001-202ENST00000527683 ABCA6Q8N139 1617 aa8.96□□□□□ -0.98
LINC01001-202ENST00000527683 KIF3BO15066 747 aa8.96□□□□□ -0.98
LINC01001-202ENST00000527683 HSPA1LP34931 641 aa8.96□□□□□ -0.98
LINC01001-202ENST00000527683 WNT2BQ93097 391 aa8.96□□□□□ -0.98
LINC01001-202ENST00000527683 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
LINC01001-202ENST00000527683 DHX29Q7Z478 1369 aaKnown RBP8.96□□□□□ -0.98
LINC01001-202ENST00000527683 CAMSAP1Q5T5Y3 1602 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 TOM1O60784 492 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 FECHP22830 423 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 BCAMP50895 628 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 PTPN5P54829 565 aa8.95□□□□□ -0.98
LINC01001-202ENST00000527683 PIP4K2BP78356 416 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms