RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 K7ELQ4 463 aaPredicted RBP12.1□□□□□ -0.47
KDM2A-204ENST00000524657 DYNC1I1O14576 645 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 PKP1Q13835 747 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 INSRP06213 1382 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
KDM2A-204ENST00000524657 SYCE3A1L190 88 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
KDM2A-204ENST00000524657 ZKSCAN5Q9Y2L8 839 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 DDIT3P35638 169 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
KDM2A-204ENST00000524657 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
KDM2A-204ENST00000524657 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
KDM2A-204ENST00000524657 ANKRD45Q5TZF3 282 aa12.08□□□□□ -0.48
KDM2A-204ENST00000524657 CCDC94Q9BW85 323 aaPredicted RBP12.08□□□□□ -0.48
KDM2A-204ENST00000524657 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
KDM2A-204ENST00000524657 E9PCH4 1651 aa12.08□□□□□ -0.48
KDM2A-204ENST00000524657 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
KDM2A-204ENST00000524657 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
KDM2A-204ENST00000524657 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
KDM2A-204ENST00000524657 DMTNQ08495 405 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 CUL7Q14999 1698 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
KDM2A-204ENST00000524657 PTMSP20962 102 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 SNX21Q969T3 373 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
KDM2A-204ENST00000524657 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
KDM2A-204ENST00000524657 TERF1P54274 439 aa12.06□□□□□ -0.48
KDM2A-204ENST00000524657 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
KDM2A-204ENST00000524657 MTERF4Q7Z6M4 381 aaKnown RBP12.06□□□□□ -0.48
KDM2A-204ENST00000524657 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
KDM2A-204ENST00000524657 RBM25P49756 843 aaKnown RBP12.05□□□□□ -0.48
KDM2A-204ENST00000524657 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
KDM2A-204ENST00000524657 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
KDM2A-204ENST00000524657 TRIM27P14373 513 aa12.05□□□□□ -0.48
KDM2A-204ENST00000524657 KIF2CQ99661 725 aa12.05□□□□□ -0.48
KDM2A-204ENST00000524657 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
KDM2A-204ENST00000524657 AK9Q5TCS8 1911 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 ZBTB22O15209 634 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
KDM2A-204ENST00000524657 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 NINLQ9Y2I6 1382 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
KDM2A-204ENST00000524657 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
KDM2A-204ENST00000524657 ATP2B3Q16720 1220 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
KDM2A-204ENST00000524657 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
KDM2A-204ENST00000524657 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
KDM2A-204ENST00000524657 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
KDM2A-204ENST00000524657 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
KDM2A-204ENST00000524657 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
KDM2A-204ENST00000524657 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
KDM2A-204ENST00000524657 RUNDC1Q96C34 613 aa12.03□□□□□ -0.48
KDM2A-204ENST00000524657 KIAA2012Q0VF49 1180 aa12.02□□□□□ -0.48
KDM2A-204ENST00000524657 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.48
KDM2A-204ENST00000524657 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.48
KDM2A-204ENST00000524657 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.48
KDM2A-204ENST00000524657 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
KDM2A-204ENST00000524657 ZNF445P59923 1031 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
KDM2A-204ENST00000524657 CHD1LQ86WJ1 897 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
KDM2A-204ENST00000524657 APBB1O00213 710 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 TTC12Q9H892 705 aaPredicted RBP12.01□□□□□ -0.49
KDM2A-204ENST00000524657 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 WDR7Q9Y4E6 1490 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 KIF16BQ96L93 1317 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 HS1BP3Q53T59 392 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
KDM2A-204ENST00000524657 U2SURPO15042 1029 aaKnown RBP12□□□□□ -0.49
KDM2A-204ENST00000524657 DNMBPQ6XZF7 1577 aa12□□□□□ -0.49
KDM2A-204ENST00000524657 NCOA3Q9Y6Q9 1424 aa12□□□□□ -0.49
KDM2A-204ENST00000524657 ZNF771Q7L3S4 317 aaPredicted RBP12□□□□□ -0.49
KDM2A-204ENST00000524657 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
KDM2A-204ENST00000524657 STAC3Q96MF2 364 aa12□□□□□ -0.49
KDM2A-204ENST00000524657 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
KDM2A-204ENST00000524657 A2MP01023 1474 aa12□□□□□ -0.49
KDM2A-204ENST00000524657 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
KDM2A-204ENST00000524657 MTHFSP49914 203 aa11.99□□□□□ -0.49
KDM2A-204ENST00000524657 WDR62O43379 1518 aa11.99□□□□□ -0.49
KDM2A-204ENST00000524657 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.49
KDM2A-204ENST00000524657 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
KDM2A-204ENST00000524657 ATF7IPQ6VMQ6 1270 aa11.99□□□□□ -0.49
KDM2A-204ENST00000524657 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
KDM2A-204ENST00000524657 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
KDM2A-204ENST00000524657 NUCB2P80303 420 aa11.98□□□□□ -0.49
KDM2A-204ENST00000524657 UTP14CQ5TAP6 766 aaKnown RBP11.98□□□□□ -0.49
KDM2A-204ENST00000524657 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
KDM2A-204ENST00000524657 GPRASP1Q5JY77 1395 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms