RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 ABCC8Q09428 1581 aa10.37□□□□□ -0.75
LINC00534-203ENST00000523406 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
LINC00534-203ENST00000523406 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
LINC00534-203ENST00000523406 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
LINC00534-203ENST00000523406 BCAMP50895 628 aa10.36□□□□□ -0.75
LINC00534-203ENST00000523406 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
LINC00534-203ENST00000523406 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
LINC00534-203ENST00000523406 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
LINC00534-203ENST00000523406 WNT2BQ93097 391 aa10.36□□□□□ -0.75
LINC00534-203ENST00000523406 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
LINC00534-203ENST00000523406 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
LINC00534-203ENST00000523406 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.751e-7■■■■■ 66.8
LINC00534-203ENST00000523406 POTEMA6NI47 508 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 PPP4CP60510 307 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 MCM6Q14566 821 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 CDAN1Q8IWY9 1227 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
LINC00534-203ENST00000523406 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
LINC00534-203ENST00000523406 HRCP23327 699 aa10.33□□□□□ -0.76
LINC00534-203ENST00000523406 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
LINC00534-203ENST00000523406 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
LINC00534-203ENST00000523406 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
LINC00534-203ENST00000523406 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
LINC00534-203ENST00000523406 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
LINC00534-203ENST00000523406 MORN1Q5T089 497 aa10.32□□□□□ -0.76
LINC00534-203ENST00000523406 APLP1P51693 650 aa10.31□□□□□ -0.76
LINC00534-203ENST00000523406 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
LINC00534-203ENST00000523406 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
LINC00534-203ENST00000523406 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
LINC00534-203ENST00000523406 NUTM2BA6NNL0 878 aaPredicted RBP10.29□□□□□ -0.76
LINC00534-203ENST00000523406 NUTM2EB1AL46 878 aaPredicted RBP10.29□□□□□ -0.76
LINC00534-203ENST00000523406 MTMR2Q13614 643 aa10.29□□□□□ -0.76
LINC00534-203ENST00000523406 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
LINC00534-203ENST00000523406 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
LINC00534-203ENST00000523406 NUTM2AQ8IVF1 878 aaPredicted RBP10.29□□□□□ -0.76
LINC00534-203ENST00000523406 CFTRP13569 1480 aa10.29□□□□□ -0.76
LINC00534-203ENST00000523406 WBP1LQ9NX94 342 aa10.28□□□□□ -0.76
LINC00534-203ENST00000523406 SLC27A5Q9Y2P5 690 aa10.28□□□□□ -0.76
LINC00534-203ENST00000523406 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
LINC00534-203ENST00000523406 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
LINC00534-203ENST00000523406 KCTD12Q96CX2 325 aaKnown RBP10.26□□□□□ -0.77
LINC00534-203ENST00000523406 EEA1Q15075 1411 aa10.25□□□□□ -0.77
LINC00534-203ENST00000523406 C6orf229H3BNL8 230 aa10.25□□□□□ -0.77
LINC00534-203ENST00000523406 AP1G2O75843 785 aa10.25□□□□□ -0.77
LINC00534-203ENST00000523406 SYMPKQ92797 1274 aaKnown RBP10.25□□□□□ -0.77
LINC00534-203ENST00000523406 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
LINC00534-203ENST00000523406 SOCS7O14512 581 aa10.24□□□□□ -0.77
LINC00534-203ENST00000523406 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
LINC00534-203ENST00000523406 Q3C1V9 767 aa10.24□□□□□ -0.77
LINC00534-203ENST00000523406 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
LINC00534-203ENST00000523406 SOGA1O94964 1423 aa10.24□□□□□ -0.77
LINC00534-203ENST00000523406 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
LINC00534-203ENST00000523406 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
LINC00534-203ENST00000523406 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 A6NJR5 290 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 RETREG3Q86VR2 466 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 SCUBE3Q8IX30 993 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 CLUAP1Q96AJ1 413 aa10.22□□□□□ -0.77
LINC00534-203ENST00000523406 BRICD5Q6PL45 260 aa10.21□□□□□ -0.77
LINC00534-203ENST00000523406 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
LINC00534-203ENST00000523406 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
LINC00534-203ENST00000523406 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
LINC00534-203ENST00000523406 THAP11Q96EK4 314 aa10.21□□□□□ -0.77
LINC00534-203ENST00000523406 NR1I2O75469 434 aa10.2□□□□□ -0.78
LINC00534-203ENST00000523406 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
LINC00534-203ENST00000523406 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
LINC00534-203ENST00000523406 POM121Q96HA1 1249 aa10.2□□□□□ -0.78
LINC00534-203ENST00000523406 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
LINC00534-203ENST00000523406 COG6Q9Y2V7 657 aa10.19□□□□□ -0.78
LINC00534-203ENST00000523406 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
LINC00534-203ENST00000523406 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
LINC00534-203ENST00000523406 DESI1Q6ICB0 168 aa10.17□□□□□ -0.78
LINC00534-203ENST00000523406 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
LINC00534-203ENST00000523406 USB1Q9BQ65 265 aaKnown RBP10.17□□□□□ -0.78
LINC00534-203ENST00000523406 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
LINC00534-203ENST00000523406 PTPN5P54829 565 aa10.16□□□□□ -0.78
LINC00534-203ENST00000523406 TSC1Q92574 1164 aa10.16□□□□□ -0.78
LINC00534-203ENST00000523406 HMX1Q9NP08 348 aaPredicted RBP10.16□□□□□ -0.78
LINC00534-203ENST00000523406 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
LINC00534-203ENST00000523406 RAD21O60216 631 aa10.15□□□□□ -0.78
LINC00534-203ENST00000523406 FNBP4Q8N3X1 1017 aaPredicted RBP10.15□□□□□ -0.78
LINC00534-203ENST00000523406 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.78
LINC00534-203ENST00000523406 CUX1P39880 1505 aa10.15□□□□□ -0.78
LINC00534-203ENST00000523406 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
LINC00534-203ENST00000523406 BIVM-ERCC5R4GMW8 1640 aa10.15□□□□□ -0.79
LINC00534-203ENST00000523406 APBB1O00213 710 aa10.14□□□□□ -0.79
LINC00534-203ENST00000523406 TRAK2O60296 914 aa10.14□□□□□ -0.79
LINC00534-203ENST00000523406 COPS2P61201 443 aa10.14□□□□□ -0.79
LINC00534-203ENST00000523406 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
LINC00534-203ENST00000523406 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
LINC00534-203ENST00000523406 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
LINC00534-203ENST00000523406 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
LINC00534-203ENST00000523406 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
LINC00534-203ENST00000523406 NESP48681 1621 aa10.12□□□□□ -0.79
LINC00534-203ENST00000523406 MSS51Q4VC12 460 aa10.12□□□□□ -0.79
LINC00534-203ENST00000523406 LYPD8Q6UX82 237 aa10.12□□□□□ -0.79
LINC00534-203ENST00000523406 MTRQ99707 1265 aa10.12□□□□□ -0.79
LINC00534-203ENST00000523406 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms