RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ZFRQ96KR1 1074 aaKnown RBP9.97□□□□□ -0.81
CSMD1-211ENST00000523062 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-211ENST00000523062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
CSMD1-211ENST00000523062 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
CSMD1-211ENST00000523062 ZNF787Q6DD87 383 aa9.95□□□□□ -0.82
CSMD1-211ENST00000523062 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
CSMD1-211ENST00000523062 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
CSMD1-211ENST00000523062 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
CSMD1-211ENST00000523062 MYO5CQ9NQX4 1742 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 CDC42BPBQ9Y5S2 1711 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 KDM6BO15054 1643 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 SAMD9LQ8IVG5 1584 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 CCDC141Q6ZP82 1450 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 C9orf84Q5VXU9 1444 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 COL9A1P20849 921 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
CSMD1-211ENST00000523062 WDR7Q9Y4E6 1490 aa9.93□□□□□ -0.82
CSMD1-211ENST00000523062 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-211ENST00000523062 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
CSMD1-211ENST00000523062 MBD5Q9P267 1494 aa9.92□□□□□ -0.82
CSMD1-211ENST00000523062 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
CSMD1-211ENST00000523062 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
CSMD1-211ENST00000523062 KIAA1468Q9P260 1216 aa9.92□□□□□ -0.82
CSMD1-211ENST00000523062 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
CSMD1-211ENST00000523062 PLCH2O75038 1416 aa9.91□□□□□ -0.82
CSMD1-211ENST00000523062 KIAA1107Q9UPP5 1409 aa9.91□□□□□ -0.82
CSMD1-211ENST00000523062 TSPY4P0CV99 314 aa9.91□□□□□ -0.82
CSMD1-211ENST00000523062 TSPY10P0CW01 314 aa9.91□□□□□ -0.82
CSMD1-211ENST00000523062 NKX1-1Q15270 411 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-211ENST00000523062 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
CSMD1-211ENST00000523062 SYCP2Q9BX26 1530 aa9.91□□□□□ -0.82
CSMD1-211ENST00000523062 MAST1Q9Y2H9 1570 aa9.9□□□□□ -0.82
CSMD1-211ENST00000523062 PDE4AP27815 886 aa9.9□□□□□ -0.82
CSMD1-211ENST00000523062 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
CSMD1-211ENST00000523062 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
CSMD1-211ENST00000523062 FBXW7Q969H0 707 aa9.89□□□□□ -0.83
CSMD1-211ENST00000523062 ANKRD50Q9ULJ7 1429 aa9.89□□□□□ -0.83
CSMD1-211ENST00000523062 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-211ENST00000523062 HNRNPMP52272 730 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSMD1-211ENST00000523062 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 EFCAB2Q5VUJ9 269 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 SIN3AQ96ST3 1273 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-211ENST00000523062 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-211ENST00000523062 ASXL2Q76L83 1435 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
CSMD1-211ENST00000523062 ABCC1P33527 1531 aa9.87□□□□□ -0.83
CSMD1-211ENST00000523062 ABCA9Q8IUA7 1624 aa9.87□□□□□ -0.83
CSMD1-211ENST00000523062 MPHOSPH9Q99550 1183 aa9.87□□□□□ -0.83
CSMD1-211ENST00000523062 PLXNC1O60486 1568 aa9.86□□□□□ -0.83
CSMD1-211ENST00000523062 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
CSMD1-211ENST00000523062 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
CSMD1-211ENST00000523062 ZNF775Q96BV0 537 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-211ENST00000523062 RYDENQ9NUL5 291 aaKnown RBP9.86□□□□□ -0.83
CSMD1-211ENST00000523062 HPS5Q9UPZ3 1129 aa9.86□□□□□ -0.83
CSMD1-211ENST00000523062 KDM5DQ9BY66 1539 aa9.86□□□□□ -0.83
CSMD1-211ENST00000523062 PZPP20742 1482 aa9.85□□□□□ -0.83
CSMD1-211ENST00000523062 DIEXFQ68CQ4 756 aaKnown RBP9.85□□□□□ -0.83
CSMD1-211ENST00000523062 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
CSMD1-211ENST00000523062 ARHGEF12Q9NZN5 1544 aa9.84□□□□□ -0.83
CSMD1-211ENST00000523062 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
CSMD1-211ENST00000523062 SEPT9Q9UHD8 586 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-211ENST00000523062 PHF14O94880 888 aa9.83□□□□□ -0.84
CSMD1-211ENST00000523062 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
CSMD1-211ENST00000523062 ANKRD30BQ9BXX2 1392 aa9.83□□□□□ -0.84
CSMD1-211ENST00000523062 PPP1R15AO75807 674 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-211ENST00000523062 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
CSMD1-211ENST00000523062 FANCAO15360 1455 aa9.82□□□□□ -0.84
CSMD1-211ENST00000523062 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
CSMD1-211ENST00000523062 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
CSMD1-211ENST00000523062 RTEL1-TNFRSF6BF6WH68 1400 aa9.81□□□□□ -0.84
CSMD1-211ENST00000523062 ERBINQ96RT1 1412 aa9.81□□□□□ -0.84
CSMD1-211ENST00000523062 TRAPPC8Q9Y2L5 1435 aa9.81□□□□□ -0.84
CSMD1-211ENST00000523062 RPRD2Q5VT52 1461 aaKnown RBP9.8□□□□□ -0.84
CSMD1-211ENST00000523062 NUP155O75694 1391 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 MFSD10Q14728 455 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 PDZRN3Q9UPQ7 1066 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 UNC13BO14795 1591 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
CSMD1-211ENST00000523062 ZFYVE16Q7Z3T8 1539 aa9.79□□□□□ -0.84
CSMD1-211ENST00000523062 PPP4CP60510 307 aa9.79□□□□□ -0.84
CSMD1-211ENST00000523062 TJAP1Q5JTD0 557 aa9.79□□□□□ -0.84
CSMD1-211ENST00000523062 SPAG9O60271 1321 aaKnown RBP9.79□□□□□ -0.84
CSMD1-211ENST00000523062 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
CSMD1-211ENST00000523062 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 TEX14Q8IWB6 1497 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
CSMD1-211ENST00000523062 INO80Q9ULG1 1556 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-211ENST00000523062 MAGI2Q86UL8 1455 aa9.77□□□□□ -0.85
CSMD1-211ENST00000523062 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.85
CSMD1-211ENST00000523062 CD109Q6YHK3 1445 aa9.76□□□□□ -0.85
CSMD1-211ENST00000523062 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
CSMD1-211ENST00000523062 EPAS1Q99814 870 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms