RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 RSPH14Q9UHP6 348 aa10.17□□□□□ -0.78
HMGB4-204ENST00000522796 DDX46Q7L014 1031 aaKnown RBP10.16□□□□□ -0.78
HMGB4-204ENST00000522796 GOLGA6CA6NDK9 693 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 GOLGA6BA6NDN3 693 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 GOLGA6DP0CG33 693 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 NME8Q8N427 588 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 MED4Q9NPJ6 270 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 GOLGA6AQ9NYA3 693 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 VIRMAQ69YN4 1812 aaKnown RBP10.16□□□□□ -0.78
HMGB4-204ENST00000522796 IGF1RP08069 1367 aa10.16□□□□□ -0.78
HMGB4-204ENST00000522796 TERF2Q15554 542 aa10.15□□□□□ -0.78
HMGB4-204ENST00000522796 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.78
HMGB4-204ENST00000522796 HIRIP3Q9BW71 556 aaPredicted RBP10.15□□□□□ -0.78
HMGB4-204ENST00000522796 TDO2P48775 406 aa10.15□□□□□ -0.78
HMGB4-204ENST00000522796 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
HMGB4-204ENST00000522796 SCAPERQ9BY12 1400 aa10.15□□□□□ -0.79
HMGB4-204ENST00000522796 PIK3R5Q8WYR1 880 aa10.14□□□□□ -0.79
HMGB4-204ENST00000522796 NCOA2Q15596 1464 aa10.14□□□□□ -0.79
HMGB4-204ENST00000522796 HSP90AB1P08238 724 aaKnown RBP10.14□□□□□ -0.79
HMGB4-204ENST00000522796 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
HMGB4-204ENST00000522796 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
HMGB4-204ENST00000522796 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
HMGB4-204ENST00000522796 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMGB4-204ENST00000522796 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
HMGB4-204ENST00000522796 FAM210AQ96ND0 272 aa10.13□□□□□ -0.79
HMGB4-204ENST00000522796 CALRP27797 417 aaKnown RBP10.13□□□□□ -0.79
HMGB4-204ENST00000522796 SKOR2Q2VWA4 1001 aaPredicted RBP10.13□□□□□ -0.79
HMGB4-204ENST00000522796 ANKRD7Q92527 254 aa10.13□□□□□ -0.79
HMGB4-204ENST00000522796 CCDC97Q96F63 343 aaPredicted RBP10.13□□□□□ -0.79
HMGB4-204ENST00000522796 PAIP2Q9BPZ3 127 aaKnown RBP10.13□□□□□ -0.79
HMGB4-204ENST00000522796 CNTLNQ9NXG0 1405 aa10.13□□□□□ -0.79
HMGB4-204ENST00000522796 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 ATL2Q8NHH9 583 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 CCDC189A1A4V9 331 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 SSFA2P28290 1259 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 PIAS4Q8N2W9 510 aaPredicted RBP10.12□□□□□ -0.79
HMGB4-204ENST00000522796 USP19O94966 1318 aa10.12□□□□□ -0.79
HMGB4-204ENST00000522796 RAD51AP2Q09MP3 1159 aa10.11□□□□□ -0.79
HMGB4-204ENST00000522796 C1QTNF12Q5T7M4 302 aa10.11□□□□□ -0.79
HMGB4-204ENST00000522796 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
HMGB4-204ENST00000522796 PRKRIP1Q9H875 184 aaPredicted RBP10.11□□□□□ -0.79
HMGB4-204ENST00000522796 BCL2L12Q9HB09 334 aa10.11□□□□□ -0.79
HMGB4-204ENST00000522796 CHMP5Q9NZZ3 219 aa10.11□□□□□ -0.79
HMGB4-204ENST00000522796 PPP1R12AO14974 1030 aaPredicted RBP10.11□□□□□ -0.79
HMGB4-204ENST00000522796 NUB1Q9Y5A7 615 aa10.11□□□□□ -0.79
HMGB4-204ENST00000522796 COQ9O75208 318 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 RPS6KL1Q9Y6S9 549 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 CLIP1P30622 1438 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
HMGB4-204ENST00000522796 KDM2BQ8NHM5 1336 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 SUFUQ9UMX1 484 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 MYOM3Q5VTT5 1437 aa10.1□□□□□ -0.79
HMGB4-204ENST00000522796 KLHL33A6NCF5 533 aa10.09□□□□□ -0.79
HMGB4-204ENST00000522796 KIF3CO14782 793 aa10.09□□□□□ -0.79
HMGB4-204ENST00000522796 NOL8Q76FK4 1167 aaKnown RBP10.09□□□□□ -0.79
HMGB4-204ENST00000522796 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
HMGB4-204ENST00000522796 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
HMGB4-204ENST00000522796 ZRSR2Q15696 482 aaKnown RBP10.09□□□□□ -0.79
HMGB4-204ENST00000522796 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
HMGB4-204ENST00000522796 MTA3Q9BTC8 594 aa10.09□□□□□ -0.79
HMGB4-204ENST00000522796 CXorf56Q9H5V9 222 aa10.09□□□□□ -0.79
HMGB4-204ENST00000522796 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
HMGB4-204ENST00000522796 LRCH2Q5VUJ6 765 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-204ENST00000522796 FHAD1B1AJZ9 1412 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 DNAJC21Q5F1R6 531 aaKnown RBP10.08□□□□□ -0.8
HMGB4-204ENST00000522796 TSC1Q92574 1164 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
HMGB4-204ENST00000522796 MORC2Q9Y6X9 1032 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-204ENST00000522796 CASQ1P31415 396 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 KIAA2012Q0VF49 1180 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 FOXD4Q12950 439 aaPredicted RBP10.07□□□□□ -0.8
HMGB4-204ENST00000522796 BIRC2Q13490 618 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
HMGB4-204ENST00000522796 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 JMYQ8N9B5 988 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 C11orf91Q3C1V1 193 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 GET4Q7L5D6 327 aaPredicted RBP10.07□□□□□ -0.8
HMGB4-204ENST00000522796 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
HMGB4-204ENST00000522796 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
HMGB4-204ENST00000522796 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
HMGB4-204ENST00000522796 GOLGA6L6A8MZA4 724 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
HMGB4-204ENST00000522796 CCDC91Q7Z6B0 441 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 ANAPC4Q9UJX5 808 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 CTAGE5O15320 804 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 TRDNQ13061 729 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
HMGB4-204ENST00000522796 ZNF280DQ6N043 979 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 GOLGA3Q08378 1498 aa10.06□□□□□ -0.8
HMGB4-204ENST00000522796 PAX7P23759 505 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 HNRNPH2P55795 449 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms