RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
GINS4-208ENST00000522642 COL22A1Q8NFW1 1626 aaPredicted RBP11.29□□□□□ -0.6
GINS4-208ENST00000522642 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.29□□□□□ -0.6
GINS4-208ENST00000522642 KCNQ2O43526 872 aa11.28□□□□□ -0.6
GINS4-208ENST00000522642 SLIT2O94813 1529 aa11.28□□□□□ -0.6
GINS4-208ENST00000522642 GLI3P10071 1580 aa11.28□□□□□ -0.6
GINS4-208ENST00000522642 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
GINS4-208ENST00000522642 LAMC1P11047 1609 aa11.27□□□□□ -0.6
GINS4-208ENST00000522642 EZH2Q15910 746 aaKnown RBP11.27□□□□□ -0.61
GINS4-208ENST00000522642 DISP2A7MBM2 1401 aa11.26□□□□□ -0.61
GINS4-208ENST00000522642 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
GINS4-208ENST00000522642 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
GINS4-208ENST00000522642 TMEM131LA2VDJ0 1609 aa11.26□□□□□ -0.61
GINS4-208ENST00000522642 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
GINS4-208ENST00000522642 EP400Q96L91 3159 aa11.25□□□□□ -0.61
GINS4-208ENST00000522642 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
GINS4-208ENST00000522642 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
GINS4-208ENST00000522642 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
GINS4-208ENST00000522642 GCC2Q8IWJ2 1684 aa11.24□□□□□ -0.61
GINS4-208ENST00000522642 FOXO3O43524 673 aa11.23□□□□□ -0.61
GINS4-208ENST00000522642 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
GINS4-208ENST00000522642 XRN1Q8IZH2 1706 aaKnown RBP11.23□□□□□ -0.61
GINS4-208ENST00000522642 APBA3O96018 575 aa11.22□□□□□ -0.61
GINS4-208ENST00000522642 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
GINS4-208ENST00000522642 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
GINS4-208ENST00000522642 MYO5BQ9ULV0 1848 aa11.21□□□□□ -0.62
GINS4-208ENST00000522642 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
GINS4-208ENST00000522642 METP08581 1390 aa11.2□□□□□ -0.62
GINS4-208ENST00000522642 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
GINS4-208ENST00000522642 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
GINS4-208ENST00000522642 ADGRL2O95490 1459 aa11.19□□□□□ -0.62
GINS4-208ENST00000522642 ABCC5O15440 1437 aa11.18□□□□□ -0.62
GINS4-208ENST00000522642 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
GINS4-208ENST00000522642 TRIM37O94972 964 aa11.18□□□□□ -0.62
GINS4-208ENST00000522642 PSME1Q06323 249 aa11.18□□□□□ -0.62
GINS4-208ENST00000522642 PTPN23Q9H3S7 1636 aa11.17□□□□□ -0.62
GINS4-208ENST00000522642 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
GINS4-208ENST00000522642 PXDNQ92626 1479 aa11.17□□□□□ -0.62
GINS4-208ENST00000522642 NALCNQ8IZF0 1738 aa11.16□□□□□ -0.62
GINS4-208ENST00000522642 FAM83GA6ND36 823 aa11.16□□□□□ -0.62
GINS4-208ENST00000522642 FAM182BQ5T319 152 aa11.16□□□□□ -0.62
GINS4-208ENST00000522642 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
GINS4-208ENST00000522642 HFM1A2PYH4 1435 aa11.14□□□□□ -0.63
GINS4-208ENST00000522642 NWD2Q9ULI1 1742 aa11.14□□□□□ -0.63
GINS4-208ENST00000522642 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
GINS4-208ENST00000522642 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
GINS4-208ENST00000522642 DAPK1P53355 1430 aa11.13□□□□□ -0.63
GINS4-208ENST00000522642 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
GINS4-208ENST00000522642 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
GINS4-208ENST00000522642 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
GINS4-208ENST00000522642 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
GINS4-208ENST00000522642 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
GINS4-208ENST00000522642 CHD4Q14839 1912 aa11.11□□□□□ -0.63
GINS4-208ENST00000522642 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
GINS4-208ENST00000522642 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
GINS4-208ENST00000522642 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
GINS4-208ENST00000522642 CABLES1Q8TDN4 633 aa11.1□□□□□ -0.63
GINS4-208ENST00000522642 ARHGEF10O15013 1369 aa11.1□□□□□ -0.63
GINS4-208ENST00000522642 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
GINS4-208ENST00000522642 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 CROCC2H7BZ55 1655 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 GPR162Q16538 588 aa11.09□□□□□ -0.63
GINS4-208ENST00000522642 NUTM2FA1L443 756 aa11.08□□□□□ -0.64
GINS4-208ENST00000522642 HSPA6P17066 643 aa11.08□□□□□ -0.64
GINS4-208ENST00000522642 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
GINS4-208ENST00000522642 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
GINS4-208ENST00000522642 IQGAP3Q86VI3 1631 aa11.08□□□□□ -0.64
GINS4-208ENST00000522642 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
GINS4-208ENST00000522642 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
GINS4-208ENST00000522642 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
GINS4-208ENST00000522642 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
GINS4-208ENST00000522642 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
GINS4-208ENST00000522642 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
GINS4-208ENST00000522642 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
GINS4-208ENST00000522642 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
GINS4-208ENST00000522642 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
GINS4-208ENST00000522642 RREB1Q92766 1687 aa11.04□□□□□ -0.64
GINS4-208ENST00000522642 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
GINS4-208ENST00000522642 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
GINS4-208ENST00000522642 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
GINS4-208ENST00000522642 NRKQ7Z2Y5 1582 aa11.03□□□□□ -0.64
GINS4-208ENST00000522642 NAIPQ13075 1403 aa11.02□□□□□ -0.64
GINS4-208ENST00000522642 NUP188Q5SRE5 1749 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 PLSCR1O15162 318 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 PTGER2P43116 358 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 APLP2Q06481 763 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 MTFR1LQ9H019 292 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 STK32BQ9NY57 414 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 DLC1Q96QB1 1528 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
GINS4-208ENST00000522642 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
GINS4-208ENST00000522642 CAPN15O75808 1086 aa11.01□□□□□ -0.65
GINS4-208ENST00000522642 ARXQ96QS3 562 aa11.01□□□□□ -0.65
GINS4-208ENST00000522642 E9PCH4 1651 aa11.01□□□□□ -0.65
GINS4-208ENST00000522642 GRIN3BO60391 1043 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms