RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 EIF3AQ14152 1382 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-220ENST00000520260 DHX57Q6P158 1386 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-220ENST00000520260 CERKQ8TCT0 537 aa8.01□□□□□ -1.13
CTNNA1-220ENST00000520260 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
CTNNA1-220ENST00000520260 PPLO60437 1756 aa8□□□□□ -1.13
CTNNA1-220ENST00000520260 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
CTNNA1-220ENST00000520260 MYO5BQ9ULV0 1848 aa7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 PIK3C2GO75747 1445 aa7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 ATF3P18847 181 aa7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 NWD1Q149M9 1564 aa7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 ZNF335Q9H4Z2 1342 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-220ENST00000520260 DCCP43146 1447 aa7.98□□□□□ -1.13
CTNNA1-220ENST00000520260 PTCH1Q13635 1447 aa7.98□□□□□ -1.13
CTNNA1-220ENST00000520260 NUTM2DQ5VT03 806 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-220ENST00000520260 CADPS2Q86UW7 1296 aa7.98□□□□□ -1.13
CTNNA1-220ENST00000520260 CENPBP07199 599 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-220ENST00000520260 FBXO41Q8TF61 875 aa7.97□□□□□ -1.13
CTNNA1-220ENST00000520260 POGKQ9P215 609 aa7.97□□□□□ -1.13
CTNNA1-220ENST00000520260 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
CTNNA1-220ENST00000520260 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
CTNNA1-220ENST00000520260 ALKQ9UM73 1620 aa7.96□□□□□ -1.13
CTNNA1-220ENST00000520260 ADAMTS13Q76LX8 1427 aa7.96□□□□□ -1.13
CTNNA1-220ENST00000520260 PRAG1Q86YV5 1406 aa7.96□□□□□ -1.13
CTNNA1-220ENST00000520260 NRXN1Q9ULB1 1477 aa7.96□□□□□ -1.13
CTNNA1-220ENST00000520260 IFT172Q9UG01 1749 aa7.96□□□□□ -1.14
CTNNA1-220ENST00000520260 SIRT1Q96EB6 747 aa7.96□□□□□ -1.14
CTNNA1-220ENST00000520260 C19orf44Q9H6X5 657 aa7.96□□□□□ -1.14
CTNNA1-220ENST00000520260 C14orf93Q9H972 538 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-220ENST00000520260 LRPPRCP42704 1394 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-220ENST00000520260 FAM135BQ49AJ0 1406 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 KIAA1210Q9ULL0 1709 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 LTBP4Q8N2S1 1624 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 ABCC11Q96J66 1382 aa7.95□□□□□ -1.14
CTNNA1-220ENST00000520260 PRR29P0C7W0 189 aa7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 FARP1Q9Y4F1 1045 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 ADGRF5Q8IZF2 1346 aa7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 CHD2O14647 1828 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 TECPR2O15040 1411 aa7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 YTHDC2Q9H6S0 1430 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-220ENST00000520260 LRRC7Q96NW7 1537 aa7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 DLC1Q96QB1 1528 aa7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 ILDR1Q86SU0 546 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 ZNF579Q8NAF0 562 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 SSUH2Q9Y2M2 353 aa7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 ADGRL3Q9HAR2 1447 aa7.93□□□□□ -1.14
CTNNA1-220ENST00000520260 KNDC1Q76NI1 1749 aa7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 XRN1Q8IZH2 1706 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 GALR2O43603 387 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 STK26Q9P289 416 aa7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 METP08581 1390 aa7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 NRXN3Q9Y4C0 1643 aa7.92□□□□□ -1.14
CTNNA1-220ENST00000520260 CDCA8Q53HL2 280 aa7.91□□□□□ -1.14
CTNNA1-220ENST00000520260 ZBTB22O15209 634 aa7.9□□□□□ -1.14
CTNNA1-220ENST00000520260 CFAP70Q5T0N1 1121 aa7.9□□□□□ -1.14
CTNNA1-220ENST00000520260 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-220ENST00000520260 CARD11Q9BXL7 1154 aa7.9□□□□□ -1.14
CTNNA1-220ENST00000520260 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
CTNNA1-220ENST00000520260 CDC42BPGQ6DT37 1551 aa7.89□□□□□ -1.15
CTNNA1-220ENST00000520260 CENPJQ9HC77 1338 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-220ENST00000520260 POTEJP0CG39 1038 aa7.89□□□□□ -1.15
CTNNA1-220ENST00000520260 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
CTNNA1-220ENST00000520260 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
CTNNA1-220ENST00000520260 RALGAPBQ86X10 1494 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 ANKARQ7Z5J8 1434 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 EVC2Q86UK5 1308 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 DIEXFQ68CQ4 756 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 PRAM1Q96QH2 718 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 ZNF692Q9BU19 519 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
CTNNA1-220ENST00000520260 ROBO2Q9HCK4 1378 aa7.87□□□□□ -1.15
CTNNA1-220ENST00000520260 SETD1AO15047 1707 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-220ENST00000520260 PSME1Q06323 249 aa7.87□□□□□ -1.15
CTNNA1-220ENST00000520260 TMEM132EQ6IEE7 984 aa7.87□□□□□ -1.15
CTNNA1-220ENST00000520260 PTPRUQ92729 1446 aa7.86□□□□□ -1.15
CTNNA1-220ENST00000520260 GPRASP1Q5JY77 1395 aa7.86□□□□□ -1.15
CTNNA1-220ENST00000520260 NPHP3Q7Z494 1330 aa7.86□□□□□ -1.15
CTNNA1-220ENST00000520260 ADGRB1O14514 1584 aa7.86□□□□□ -1.15
CTNNA1-220ENST00000520260 TRPM1Q7Z4N2 1603 aa7.85□□□□□ -1.15
CTNNA1-220ENST00000520260 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
CTNNA1-220ENST00000520260 SRPK2P78362 688 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-220ENST00000520260 ZRANB1Q9UGI0 708 aa7.85□□□□□ -1.15
CTNNA1-220ENST00000520260 KIF1AQ12756 1690 aa7.85□□□□□ -1.15
CTNNA1-220ENST00000520260 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 SBNO2Q9Y2G9 1366 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 TMF1P82094 1093 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 STRCP1A6NGW2 1772 aa7.84□□□□□ -1.15
CTNNA1-220ENST00000520260 BRD4O60885 1362 aaPredicted RBP7.84□□□□□ -1.16
CTNNA1-220ENST00000520260 WASLO00401 505 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 SAFB2Q14151 953 aaKnown RBP eCLIP7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms