RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 KIAA0556O60303 1618 aa8.54□□□□□ -1.04
CTNNA1-218ENST00000519768 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-218ENST00000519768 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
CTNNA1-218ENST00000519768 UGGT2Q9NYU1 1516 aa8.54□□□□□ -1.04
CTNNA1-218ENST00000519768 ABCA8O94911 1581 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 FECHP22830 423 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 YEATS2Q9ULM3 1422 aa8.53□□□□□ -1.04
CTNNA1-218ENST00000519768 TK2O00142 265 aa8.52□□□□□ -1.05
CTNNA1-218ENST00000519768 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-218ENST00000519768 ATP10BO94823 1461 aa8.51□□□□□ -1.05
CTNNA1-218ENST00000519768 IRF6O14896 467 aa8.51□□□□□ -1.05
CTNNA1-218ENST00000519768 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
CTNNA1-218ENST00000519768 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
CTNNA1-218ENST00000519768 VPS9D1Q9Y2B5 631 aa8.51□□□□□ -1.05
CTNNA1-218ENST00000519768 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
CTNNA1-218ENST00000519768 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
CTNNA1-218ENST00000519768 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
CTNNA1-218ENST00000519768 AK7Q96M32 723 aa8.49□□□□□ -1.05
CTNNA1-218ENST00000519768 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
CTNNA1-218ENST00000519768 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
CTNNA1-218ENST00000519768 UBAP1LF5GYI3 381 aa8.48□□□□□ -1.05
CTNNA1-218ENST00000519768 OATP04181 439 aa8.48□□□□□ -1.05
CTNNA1-218ENST00000519768 HSPA1LP34931 641 aa8.48□□□□□ -1.05
CTNNA1-218ENST00000519768 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
CTNNA1-218ENST00000519768 ABCA9Q8IUA7 1624 aa8.47□□□□□ -1.05
CTNNA1-218ENST00000519768 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
CTNNA1-218ENST00000519768 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
CTNNA1-218ENST00000519768 ZNF335Q9H4Z2 1342 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-218ENST00000519768 RICTORQ6R327 1708 aa8.46□□□□□ -1.05
CTNNA1-218ENST00000519768 ARHGEF40Q8TER5 1519 aa8.46□□□□□ -1.05
CTNNA1-218ENST00000519768 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 IFFO2Q5TF58 517 aa8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 TATDN2Q93075 761 aa8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 PTPRTO14522 1441 aa8.46□□□□□ -1.06
CTNNA1-218ENST00000519768 FER1L4A9Z1Z3 1794 aa8.45□□□□□ -1.06
CTNNA1-218ENST00000519768 NEO1Q92859 1461 aa8.45□□□□□ -1.06
CTNNA1-218ENST00000519768 Q6ZNB5 142 aa8.45□□□□□ -1.06
CTNNA1-218ENST00000519768 RBM46Q8TBY0 533 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-218ENST00000519768 EYA1Q99502 592 aa8.45□□□□□ -1.06
CTNNA1-218ENST00000519768 MED1Q15648 1581 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 TTC37Q6PGP7 1564 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 HRO43593 1189 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 NUDT18Q6ZVK8 323 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 RGS17Q9UGC6 210 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 FHOD3Q2V2M9 1422 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 DENND4BO75064 1496 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-218ENST00000519768 TRIM66O15016 1216 aa8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 LAPTM4BQ86VI4 370 aa8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 PNMA3Q9UL41 463 aa8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
CTNNA1-218ENST00000519768 A0A0G2JS52 829 aa8.42□□□□□ -1.06
CTNNA1-218ENST00000519768 C3orf80F5H4A9 247 aa8.42□□□□□ -1.06
CTNNA1-218ENST00000519768 ARHGEF12Q9NZN5 1544 aa8.42□□□□□ -1.06
CTNNA1-218ENST00000519768 SETD1BQ9UPS6 1966 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-218ENST00000519768 HECW1Q76N89 1606 aa8.41□□□□□ -1.06
CTNNA1-218ENST00000519768 FANCAO15360 1455 aa8.41□□□□□ -1.06
CTNNA1-218ENST00000519768 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
CTNNA1-218ENST00000519768 AMHR2Q16671 573 aa8.41□□□□□ -1.06
CTNNA1-218ENST00000519768 POGZQ7Z3K3 1410 aa8.4□□□□□ -1.06
CTNNA1-218ENST00000519768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-218ENST00000519768 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-218ENST00000519768 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
CTNNA1-218ENST00000519768 SRCAPQ6ZRS2 3230 aa8.4□□□□□ -1.07
CTNNA1-218ENST00000519768 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
CTNNA1-218ENST00000519768 UHRF1BP1Q6BDS2 1440 aa8.39□□□□□ -1.07
CTNNA1-218ENST00000519768 SMAPO00193 183 aa8.39□□□□□ -1.07
CTNNA1-218ENST00000519768 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-218ENST00000519768 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 NCOA1Q15788 1441 aa8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 DNAJB2P25686 324 aa8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 SEPT9Q9UHD8 586 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-218ENST00000519768 PDE4DQ08499 809 aa8.37□□□□□ -1.07
CTNNA1-218ENST00000519768 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
CTNNA1-218ENST00000519768 CLCN1P35523 988 aa8.36□□□□□ -1.07
CTNNA1-218ENST00000519768 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
CTNNA1-218ENST00000519768 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
CTNNA1-218ENST00000519768 ATP10AO60312 1499 aa8.36□□□□□ -1.07
CTNNA1-218ENST00000519768 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
CTNNA1-218ENST00000519768 C3P01024 1663 aa8.35□□□□□ -1.07
CTNNA1-218ENST00000519768 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-218ENST00000519768 AFAP1Q8N556 730 aa8.35□□□□□ -1.07
CTNNA1-218ENST00000519768 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-218ENST00000519768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms