RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
ARFGEF1-202ENST00000517955 PTPRUQ92729 1446 aa16.16■□□□□ 0.18
ARFGEF1-202ENST00000517955 USP47Q96K76 1375 aa16.15■□□□□ 0.18
ARFGEF1-202ENST00000517955 KCNA6P17658 529 aa16.15■□□□□ 0.18
ARFGEF1-202ENST00000517955 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
ARFGEF1-202ENST00000517955 XRN1Q8IZH2 1706 aaKnown RBP16.15■□□□□ 0.18
ARFGEF1-202ENST00000517955 EIF3AQ14152 1382 aaKnown RBP16.14■□□□□ 0.17
ARFGEF1-202ENST00000517955 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
ARFGEF1-202ENST00000517955 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
ARFGEF1-202ENST00000517955 CPS1P31327 1500 aa16.14■□□□□ 0.17
ARFGEF1-202ENST00000517955 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
ARFGEF1-202ENST00000517955 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
ARFGEF1-202ENST00000517955 ARHGEF28Q8N1W1 1705 aaKnown RBP16.12■□□□□ 0.17
ARFGEF1-202ENST00000517955 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
ARFGEF1-202ENST00000517955 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
ARFGEF1-202ENST00000517955 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
ARFGEF1-202ENST00000517955 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
ARFGEF1-202ENST00000517955 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
ARFGEF1-202ENST00000517955 STK26Q9P289 416 aa16.09■□□□□ 0.17
ARFGEF1-202ENST00000517955 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
ARFGEF1-202ENST00000517955 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
ARFGEF1-202ENST00000517955 TESK2Q96S53 571 aa16.08■□□□□ 0.16
ARFGEF1-202ENST00000517955 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
ARFGEF1-202ENST00000517955 PRAM1Q96QH2 718 aa16.06■□□□□ 0.16
ARFGEF1-202ENST00000517955 STRCP1A6NGW2 1772 aa16.05■□□□□ 0.16
ARFGEF1-202ENST00000517955 POGKQ9P215 609 aa16.05■□□□□ 0.16
ARFGEF1-202ENST00000517955 WAPLQ7Z5K2 1190 aa16.04■□□□□ 0.16
ARFGEF1-202ENST00000517955 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
ARFGEF1-202ENST00000517955 QRICH2Q9H0J4 1663 aa16.03■□□□□ 0.16
ARFGEF1-202ENST00000517955 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
ARFGEF1-202ENST00000517955 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
ARFGEF1-202ENST00000517955 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
ARFGEF1-202ENST00000517955 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
ARFGEF1-202ENST00000517955 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
ARFGEF1-202ENST00000517955 TMF1P82094 1093 aa16■□□□□ 0.15
ARFGEF1-202ENST00000517955 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
ARFGEF1-202ENST00000517955 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
ARFGEF1-202ENST00000517955 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
ARFGEF1-202ENST00000517955 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
ARFGEF1-202ENST00000517955 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
ARFGEF1-202ENST00000517955 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
ARFGEF1-202ENST00000517955 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
ARFGEF1-202ENST00000517955 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
ARFGEF1-202ENST00000517955 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
ARFGEF1-202ENST00000517955 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
ARFGEF1-202ENST00000517955 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
ARFGEF1-202ENST00000517955 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
ARFGEF1-202ENST00000517955 C19orf44Q9H6X5 657 aa15.96■□□□□ 0.15
ARFGEF1-202ENST00000517955 MINK1Q8N4C8 1332 aaPredicted RBP15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 DCCP43146 1447 aa15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 DISP3Q9P2K9 1392 aa15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
ARFGEF1-202ENST00000517955 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
ARFGEF1-202ENST00000517955 CCDC7Q96M83 1385 aa15.93■□□□□ 0.14
ARFGEF1-202ENST00000517955 CDK19Q9BWU1 502 aa15.93■□□□□ 0.14
ARFGEF1-202ENST00000517955 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
ARFGEF1-202ENST00000517955 KIF7Q2M1P5 1343 aa15.92■□□□□ 0.14
ARFGEF1-202ENST00000517955 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
ARFGEF1-202ENST00000517955 MSH6P52701 1360 aa15.9■□□□□ 0.14
ARFGEF1-202ENST00000517955 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
ARFGEF1-202ENST00000517955 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
ARFGEF1-202ENST00000517955 FMN2Q9NZ56 1722 aa15.9■□□□□ 0.14
ARFGEF1-202ENST00000517955 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
ARFGEF1-202ENST00000517955 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
ARFGEF1-202ENST00000517955 FBXO41Q8TF61 875 aa15.89■□□□□ 0.13
ARFGEF1-202ENST00000517955 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
ARFGEF1-202ENST00000517955 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
ARFGEF1-202ENST00000517955 ATP7BP35670 1465 aa15.87■□□□□ 0.13
ARFGEF1-202ENST00000517955 C14orf37Q86TY3 774 aa15.87■□□□□ 0.13
ARFGEF1-202ENST00000517955 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
ARFGEF1-202ENST00000517955 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
ARFGEF1-202ENST00000517955 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
ARFGEF1-202ENST00000517955 ATF3P18847 181 aa15.86■□□□□ 0.13
ARFGEF1-202ENST00000517955 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
ARFGEF1-202ENST00000517955 USP32Q8NFA0 1604 aa15.86■□□□□ 0.13
ARFGEF1-202ENST00000517955 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
ARFGEF1-202ENST00000517955 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
ARFGEF1-202ENST00000517955 TOPAZ1Q8N9V7 1692 aa15.84■□□□□ 0.13
ARFGEF1-202ENST00000517955 MST1RQ04912 1400 aa15.84■□□□□ 0.13
ARFGEF1-202ENST00000517955 MYOM1P52179 1685 aa15.83■□□□□ 0.13
ARFGEF1-202ENST00000517955 ITSN1Q15811 1721 aa15.83■□□□□ 0.13
ARFGEF1-202ENST00000517955 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
ARFGEF1-202ENST00000517955 PPIP5K1Q6PFW1 1433 aa15.81■□□□□ 0.12
ARFGEF1-202ENST00000517955 RGPD8O14715 1765 aaPredicted RBP15.8■□□□□ 0.12
ARFGEF1-202ENST00000517955 CPSF1Q10570 1443 aaKnown RBP15.8■□□□□ 0.12
ARFGEF1-202ENST00000517955 POLR3AO14802 1390 aaPredicted RBP15.8■□□□□ 0.12
ARFGEF1-202ENST00000517955 SLC12A5Q9H2X9 1139 aa15.8■□□□□ 0.12
ARFGEF1-202ENST00000517955 CABP1Q9NZU7 370 aa15.8■□□□□ 0.12
ARFGEF1-202ENST00000517955 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
ARFGEF1-202ENST00000517955 CERKQ8TCT0 537 aa15.79■□□□□ 0.12
ARFGEF1-202ENST00000517955 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
ARFGEF1-202ENST00000517955 SLAIN2Q9P270 581 aa15.79■□□□□ 0.12
ARFGEF1-202ENST00000517955 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
ARFGEF1-202ENST00000517955 TERF2IPQ9NYB0 399 aa15.78■□□□□ 0.12
ARFGEF1-202ENST00000517955 BRD4O60885 1362 aaPredicted RBP15.77■□□□□ 0.12
ARFGEF1-202ENST00000517955 KIF1AQ12756 1690 aa15.77■□□□□ 0.12
ARFGEF1-202ENST00000517955 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
ARFGEF1-202ENST00000517955 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms