RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 AMHR2Q16671 573 aa9.57□□□□□ -0.88
NSMCE2-202ENST00000517315 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
NSMCE2-202ENST00000517315 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
NSMCE2-202ENST00000517315 NR1I2O75469 434 aa9.56□□□□□ -0.88
NSMCE2-202ENST00000517315 TTLL12Q14166 644 aaPredicted RBP9.56□□□□□ -0.88
NSMCE2-202ENST00000517315 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
NSMCE2-202ENST00000517315 AK7Q96M32 723 aa9.56□□□□□ -0.88
NSMCE2-202ENST00000517315 TRIM66O15016 1216 aa9.55□□□□□ -0.88
NSMCE2-202ENST00000517315 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
NSMCE2-202ENST00000517315 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
NSMCE2-202ENST00000517315 MORN1Q5T089 497 aa9.54□□□□□ -0.88
NSMCE2-202ENST00000517315 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
NSMCE2-202ENST00000517315 SCUBE3Q8IX30 993 aa9.54□□□□□ -0.88
NSMCE2-202ENST00000517315 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
NSMCE2-202ENST00000517315 RGS20O76081 388 aa9.53□□□□□ -0.88
NSMCE2-202ENST00000517315 CUX2O14529 1486 aa9.53□□□□□ -0.88
NSMCE2-202ENST00000517315 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
NSMCE2-202ENST00000517315 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.89
NSMCE2-202ENST00000517315 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
NSMCE2-202ENST00000517315 KIF27Q86VH2 1401 aa9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 KDM4AO75164 1064 aa9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 ADH1BP00325 375 aa9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
NSMCE2-202ENST00000517315 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
NSMCE2-202ENST00000517315 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
NSMCE2-202ENST00000517315 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
NSMCE2-202ENST00000517315 RUSC2Q8N2Y8 1516 aa9.5□□□□□ -0.89
NSMCE2-202ENST00000517315 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
NSMCE2-202ENST00000517315 EEA1Q15075 1411 aa9.49□□□□□ -0.89
NSMCE2-202ENST00000517315 GGCXP38435 758 aa9.48□□□□□ -0.89
NSMCE2-202ENST00000517315 PDE4DQ08499 809 aa9.48□□□□□ -0.89
NSMCE2-202ENST00000517315 S1PR4O95977 384 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 USP46P62068 366 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 HLA-CQ95604 372 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 SPSB2Q99619 263 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
NSMCE2-202ENST00000517315 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.89
NSMCE2-202ENST00000517315 HOXA2O43364 376 aa9.46□□□□□ -0.9
NSMCE2-202ENST00000517315 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
NSMCE2-202ENST00000517315 PBRM1Q86U86 1689 aa9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 MS4A1P11836 297 aa9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 SLC6A16Q9GZN6 736 aa9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
NSMCE2-202ENST00000517315 PPEF1O14829 653 aaPredicted RBP9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 BRICD5Q6PL45 260 aa9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 BEGAINQ9BUH8 593 aa9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 EIF4G3O43432 1585 aaKnown RBP9.44□□□□□ -0.9
NSMCE2-202ENST00000517315 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 IGF1RP08069 1367 aa9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 Q3C1V9 767 aa9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 FAM160A2Q8N612 972 aaPredicted RBP9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
NSMCE2-202ENST00000517315 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
NSMCE2-202ENST00000517315 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
NSMCE2-202ENST00000517315 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
NSMCE2-202ENST00000517315 CUL7Q14999 1698 aa9.4□□□□□ -0.9
NSMCE2-202ENST00000517315 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
NSMCE2-202ENST00000517315 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
NSMCE2-202ENST00000517315 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
NSMCE2-202ENST00000517315 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
NSMCE2-202ENST00000517315 FDX1P10109 184 aa9.38□□□□□ -0.91
NSMCE2-202ENST00000517315 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
NSMCE2-202ENST00000517315 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 NDUFV2P19404 249 aa9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 USB1Q9BQ65 265 aaKnown RBP9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 KIF21BO75037 1637 aa9.37□□□□□ -0.91
NSMCE2-202ENST00000517315 MAGI1Q96QZ7 1491 aaPredicted RBP9.36□□□□□ -0.91
NSMCE2-202ENST00000517315 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
NSMCE2-202ENST00000517315 SYMPKQ92797 1274 aaKnown RBP9.36□□□□□ -0.91
NSMCE2-202ENST00000517315 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
NSMCE2-202ENST00000517315 PRXQ9BXM0 1461 aa9.35□□□□□ -0.91
NSMCE2-202ENST00000517315 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
NSMCE2-202ENST00000517315 DIXDC1Q155Q3 683 aa9.35□□□□□ -0.91
NSMCE2-202ENST00000517315 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
NSMCE2-202ENST00000517315 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
NSMCE2-202ENST00000517315 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
NSMCE2-202ENST00000517315 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
NSMCE2-202ENST00000517315 SLC19A1P41440 591 aa9.34□□□□□ -0.91
NSMCE2-202ENST00000517315 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
NSMCE2-202ENST00000517315 GPBP1L1Q9HC44 474 aaPredicted RBP9.34□□□□□ -0.91
NSMCE2-202ENST00000517315 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
NSMCE2-202ENST00000517315 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
NSMCE2-202ENST00000517315 CHD1O14646 1710 aa9.32□□□□□ -0.92
NSMCE2-202ENST00000517315 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
NSMCE2-202ENST00000517315 MMP16P51512 607 aa9.32□□□□□ -0.92
NSMCE2-202ENST00000517315 RSBN1LQ6PCB5 846 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms