RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
ERCC6-208ENST00000515869 PCDHB15Q9Y5E8 787 aa11.09□□□□□ -0.63
ERCC6-208ENST00000515869 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
ERCC6-208ENST00000515869 PMFBP1Q8TBY8 1022 aa11.08□□□□□ -0.64
ERCC6-208ENST00000515869 NAP1L5Q96NT1 182 aaPredicted RBP11.08□□□□□ -0.64
ERCC6-208ENST00000515869 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
ERCC6-208ENST00000515869 RLBP1P12271 317 aa11.07□□□□□ -0.64
ERCC6-208ENST00000515869 MFAP1P55081 439 aaKnown RBP11.07□□□□□ -0.64
ERCC6-208ENST00000515869 IDI1Q13907 227 aa11.07□□□□□ -0.64
ERCC6-208ENST00000515869 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
ERCC6-208ENST00000515869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
ERCC6-208ENST00000515869 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 PANK2Q9BZ23 570 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 GLI2P10070 1586 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 RARSP54136 660 aaKnown RBP11.06□□□□□ -0.64
ERCC6-208ENST00000515869 TBC1D32Q96NH3 1257 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
ERCC6-208ENST00000515869 XRCC6P12956 609 aaKnown RBP eCLIP11.05□□□□□ -0.64
ERCC6-208ENST00000515869 FBLN1P23142 703 aa11.05□□□□□ -0.64
ERCC6-208ENST00000515869 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
ERCC6-208ENST00000515869 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
ERCC6-208ENST00000515869 FTSJ3Q8IY81 847 aaKnown RBP11.05□□□□□ -0.64
ERCC6-208ENST00000515869 TCP11L2Q8N4U5 519 aa11.05□□□□□ -0.64
ERCC6-208ENST00000515869 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
ERCC6-208ENST00000515869 MCM4P33991 863 aa11.04□□□□□ -0.64
ERCC6-208ENST00000515869 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
ERCC6-208ENST00000515869 ARHGEF5Q12774 1597 aa11.04□□□□□ -0.64
ERCC6-208ENST00000515869 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
ERCC6-208ENST00000515869 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
ERCC6-208ENST00000515869 ZCCHC11Q5TAX3 1644 aaKnown RBP11.03□□□□□ -0.64
ERCC6-208ENST00000515869 WAPLQ7Z5K2 1190 aa11.03□□□□□ -0.64
ERCC6-208ENST00000515869 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.64
ERCC6-208ENST00000515869 TRAK2O60296 914 aa11.02□□□□□ -0.64
ERCC6-208ENST00000515869 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.64
ERCC6-208ENST00000515869 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
ERCC6-208ENST00000515869 RUNDC1Q96C34 613 aa11.02□□□□□ -0.65
ERCC6-208ENST00000515869 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.65
ERCC6-208ENST00000515869 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
ERCC6-208ENST00000515869 NGEFQ8N5V2 710 aa11.01□□□□□ -0.65
ERCC6-208ENST00000515869 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
ERCC6-208ENST00000515869 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
ERCC6-208ENST00000515869 U2AF1L5P0DN76 240 aaPredicted RBP11□□□□□ -0.65
ERCC6-208ENST00000515869 U2AF1Q01081 240 aaKnown RBP eCLIP11□□□□□ -0.65
ERCC6-208ENST00000515869 HSCBQ8IWL3 235 aa11□□□□□ -0.65
ERCC6-208ENST00000515869 MYO5CQ9NQX4 1742 aa11□□□□□ -0.65
ERCC6-208ENST00000515869 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 MTHFSP49914 203 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 LAMC1P11047 1609 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 UGGT1Q9NYU2 1555 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 TSR2Q969E8 191 aaKnown RBP10.99□□□□□ -0.65
ERCC6-208ENST00000515869 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 NUTM2GQ5VZR2 741 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
ERCC6-208ENST00000515869 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 ZKSCAN2Q63HK3 967 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 DZIP1LQ8IYY4 767 aaKnown RBP10.98□□□□□ -0.65
ERCC6-208ENST00000515869 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 MVPQ14764 893 aaKnown RBP10.98□□□□□ -0.65
ERCC6-208ENST00000515869 NCKAP5LQ9HCH0 1330 aa10.98□□□□□ -0.65
ERCC6-208ENST00000515869 HSP90AA1P07900 732 aaKnown RBP10.97□□□□□ -0.65
ERCC6-208ENST00000515869 CFAP53Q96M91 514 aa10.97□□□□□ -0.65
ERCC6-208ENST00000515869 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
ERCC6-208ENST00000515869 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
ERCC6-208ENST00000515869 SYNMO15061 1565 aa10.97□□□□□ -0.65
ERCC6-208ENST00000515869 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.65
ERCC6-208ENST00000515869 UNC13BO14795 1591 aa10.96□□□□□ -0.65
ERCC6-208ENST00000515869 WDR63Q8IWG1 891 aa10.96□□□□□ -0.66
ERCC6-208ENST00000515869 FSD2A1L4K1 749 aa10.96□□□□□ -0.66
ERCC6-208ENST00000515869 MRE11P49959 708 aa10.96□□□□□ -0.66
ERCC6-208ENST00000515869 AAMPQ13685 434 aa10.96□□□□□ -0.66
ERCC6-208ENST00000515869 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 HSP90AB1P08238 724 aaKnown RBP10.95□□□□□ -0.66
ERCC6-208ENST00000515869 GLIPR1L2Q4G1C9 344 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 ATP10AO60312 1499 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
ERCC6-208ENST00000515869 DUOX2Q9NRD8 1548 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
ERCC6-208ENST00000515869 NOS1P29475 1434 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 GRPEL1Q9HAV7 217 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
ERCC6-208ENST00000515869 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
ERCC6-208ENST00000515869 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 PREX2Q70Z35 1606 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
ERCC6-208ENST00000515869 PHF23Q9BUL5 403 aaPredicted RBP10.94□□□□□ -0.66
ERCC6-208ENST00000515869 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 CLCN1P35523 988 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
ERCC6-208ENST00000515869 MAST1Q9Y2H9 1570 aa10.93□□□□□ -0.66
ERCC6-208ENST00000515869 TRIM27P14373 513 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms