RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 AP1G2O75843 785 aa9.56□□□□□ -0.88
CAST-243ENST00000515160 GJA5P36382 358 aa9.56□□□□□ -0.88
CAST-243ENST00000515160 GLMNQ92990 594 aa9.56□□□□□ -0.88
CAST-243ENST00000515160 SLC4A5Q9BY07 1137 aa9.56□□□□□ -0.88
CAST-243ENST00000515160 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 LILRB3O75022 631 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 WNT2BQ93097 391 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 EYA1Q99502 592 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 TBC1D2BQ9UPU7 963 aa9.55□□□□□ -0.88
CAST-243ENST00000515160 IRF5Q13568 498 aa9.54□□□□□ -0.88
CAST-243ENST00000515160 TMCO4Q5TGY1 634 aa9.54□□□□□ -0.88
CAST-243ENST00000515160 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
CAST-243ENST00000515160 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
CAST-243ENST00000515160 POM121CA8CG34 1229 aa9.53□□□□□ -0.88
CAST-243ENST00000515160 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
CAST-243ENST00000515160 QPCTQ16769 361 aa9.53□□□□□ -0.88
CAST-243ENST00000515160 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
CAST-243ENST00000515160 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
CAST-243ENST00000515160 MRPL50Q8N5N7 158 aaKnown RBP9.53□□□□□ -0.88
CAST-243ENST00000515160 USP17L8P0C7I0 530 aa9.52□□□□□ -0.89
CAST-243ENST00000515160 NDUFV2P19404 249 aa9.52□□□□□ -0.89
CAST-243ENST00000515160 DNAJB2P25686 324 aa9.52□□□□□ -0.89
CAST-243ENST00000515160 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
CAST-243ENST00000515160 FAM198AQ9UFP1 575 aa9.52□□□□□ -0.89
CAST-243ENST00000515160 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
CAST-243ENST00000515160 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
CAST-243ENST00000515160 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
CAST-243ENST00000515160 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
CAST-243ENST00000515160 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
CAST-243ENST00000515160 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
CAST-243ENST00000515160 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
CAST-243ENST00000515160 LAPTM4AQ15012 233 aa9.49□□□□□ -0.89
CAST-243ENST00000515160 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
CAST-243ENST00000515160 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
CAST-243ENST00000515160 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
CAST-243ENST00000515160 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
CAST-243ENST00000515160 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
CAST-243ENST00000515160 LCE2BO14633 110 aa9.48□□□□□ -0.89
CAST-243ENST00000515160 PTPREP23469 700 aa9.48□□□□□ -0.89
CAST-243ENST00000515160 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
CAST-243ENST00000515160 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
CAST-243ENST00000515160 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 COL9A1P20849 921 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 RGS22Q8NE09 1264 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 PNMA3Q9UL41 463 aa9.47□□□□□ -0.89
CAST-243ENST00000515160 KDM4AO75164 1064 aa9.46□□□□□ -0.9
CAST-243ENST00000515160 MFAP1P55081 439 aaKnown RBP9.46□□□□□ -0.9
CAST-243ENST00000515160 USP46P62068 366 aa9.45□□□□□ -0.9
CAST-243ENST00000515160 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
CAST-243ENST00000515160 TATDN2Q93075 761 aa9.45□□□□□ -0.9
CAST-243ENST00000515160 GJD4Q96KN9 370 aaPredicted RBP9.45□□□□□ -0.9
CAST-243ENST00000515160 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
CAST-243ENST00000515160 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
CAST-243ENST00000515160 LAMC3Q9Y6N6 1575 aa9.44□□□□□ -0.9
CAST-243ENST00000515160 ITGBL1O95965 494 aaPredicted RBP9.43□□□□□ -0.9
CAST-243ENST00000515160 CSB-PGBD3P0DP91 1061 aa9.43□□□□□ -0.9
CAST-243ENST00000515160 RFX1P22670 979 aa9.43□□□□□ -0.9
CAST-243ENST00000515160 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
CAST-243ENST00000515160 USTQ9Y2C2 406 aa9.43□□□□□ -0.9
CAST-243ENST00000515160 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 C3orf80F5H4A9 247 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 FDX1P10109 184 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
CAST-243ENST00000515160 BAZ1AQ9NRL2 1556 aaPredicted RBP9.41□□□□□ -0.9
CAST-243ENST00000515160 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
CAST-243ENST00000515160 HOXA2O43364 376 aa9.41□□□□□ -0.9
CAST-243ENST00000515160 BRD1O95696 1058 aa9.41□□□□□ -0.9
CAST-243ENST00000515160 KCNA1Q09470 495 aa9.41□□□□□ -0.9
CAST-243ENST00000515160 GCGRP47871 477 aa9.4□□□□□ -0.9
CAST-243ENST00000515160 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.9
CAST-243ENST00000515160 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
CAST-243ENST00000515160 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
CAST-243ENST00000515160 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
CAST-243ENST00000515160 NYAP1Q6ZVC0 841 aa9.39□□□□□ -0.91
CAST-243ENST00000515160 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
CAST-243ENST00000515160 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
CAST-243ENST00000515160 WDR62O43379 1518 aa9.38□□□□□ -0.91
CAST-243ENST00000515160 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
CAST-243ENST00000515160 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
CAST-243ENST00000515160 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
CAST-243ENST00000515160 SMAPO00193 183 aa9.37□□□□□ -0.91
CAST-243ENST00000515160 SRPK2P78362 688 aaKnown RBP9.37□□□□□ -0.91
CAST-243ENST00000515160 BAZ1BQ9UIG0 1483 aaKnown RBP9.36□□□□□ -0.91
CAST-243ENST00000515160 KCNC4Q03721 635 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 MTMR2Q13614 643 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 TSC1Q92574 1164 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 PCDHGC3Q9UN70 934 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 PDS5BQ9NTI5 1447 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 PEG3Q9GZU2 1588 aa9.36□□□□□ -0.91
CAST-243ENST00000515160 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
CAST-243ENST00000515160 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms