RNA–Protein interactions for RNA: ENST00000513268.1

H2AFY-220, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-220ENST00000513268 PRAG1Q86YV5 1406 aa13.35□□□□□ -0.27
H2AFY-220ENST00000513268 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
H2AFY-220ENST00000513268 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
H2AFY-220ENST00000513268 METP08581 1390 aa13.33□□□□□ -0.27
H2AFY-220ENST00000513268 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
H2AFY-220ENST00000513268 RGL3Q3MIN7 710 aa13.33□□□□□ -0.28
H2AFY-220ENST00000513268 ALKQ9UM73 1620 aa13.32□□□□□ -0.28
H2AFY-220ENST00000513268 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
H2AFY-220ENST00000513268 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
H2AFY-220ENST00000513268 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
H2AFY-220ENST00000513268 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
H2AFY-220ENST00000513268 DCCP43146 1447 aa13.31□□□□□ -0.28
H2AFY-220ENST00000513268 PPLO60437 1756 aa13.31□□□□□ -0.28
H2AFY-220ENST00000513268 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
H2AFY-220ENST00000513268 ATF3P18847 181 aa13.3□□□□□ -0.28
H2AFY-220ENST00000513268 HSPA1LP34931 641 aa13.3□□□□□ -0.28
H2AFY-220ENST00000513268 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
H2AFY-220ENST00000513268 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
H2AFY-220ENST00000513268 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
H2AFY-220ENST00000513268 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
H2AFY-220ENST00000513268 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
H2AFY-220ENST00000513268 MYOM2P54296 1465 aa13.29□□□□□ -0.28
H2AFY-220ENST00000513268 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
H2AFY-220ENST00000513268 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
H2AFY-220ENST00000513268 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
H2AFY-220ENST00000513268 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
H2AFY-220ENST00000513268 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
H2AFY-220ENST00000513268 TECPR2O15040 1411 aa13.26□□□□□ -0.29
H2AFY-220ENST00000513268 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
H2AFY-220ENST00000513268 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
H2AFY-220ENST00000513268 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
H2AFY-220ENST00000513268 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
H2AFY-220ENST00000513268 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
H2AFY-220ENST00000513268 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
H2AFY-220ENST00000513268 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
H2AFY-220ENST00000513268 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
H2AFY-220ENST00000513268 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
H2AFY-220ENST00000513268 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
H2AFY-220ENST00000513268 LAMC1P11047 1609 aa13.21□□□□□ -0.3
H2AFY-220ENST00000513268 CFAP70Q5T0N1 1121 aa13.2□□□□□ -0.3
H2AFY-220ENST00000513268 TMEM132EQ6IEE7 984 aa13.19□□□□□ -0.3
H2AFY-220ENST00000513268 MST1RQ04912 1400 aa13.19□□□□□ -0.3
H2AFY-220ENST00000513268 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
H2AFY-220ENST00000513268 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
H2AFY-220ENST00000513268 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
H2AFY-220ENST00000513268 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
H2AFY-220ENST00000513268 STK26Q9P289 416 aa13.16□□□□□ -0.3
H2AFY-220ENST00000513268 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
H2AFY-220ENST00000513268 JCADQ9P266 1359 aa13.16□□□□□ -0.3
H2AFY-220ENST00000513268 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
H2AFY-220ENST00000513268 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
H2AFY-220ENST00000513268 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
H2AFY-220ENST00000513268 CLCN6P51797 869 aa13.15□□□□□ -0.3
H2AFY-220ENST00000513268 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
H2AFY-220ENST00000513268 C1orf167Q5SNV9 1468 aa13.15□□□□□ -0.3
H2AFY-220ENST00000513268 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
H2AFY-220ENST00000513268 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
H2AFY-220ENST00000513268 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
H2AFY-220ENST00000513268 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
H2AFY-220ENST00000513268 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
H2AFY-220ENST00000513268 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
H2AFY-220ENST00000513268 POGKQ9P215 609 aa13.12□□□□□ -0.31
H2AFY-220ENST00000513268 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
H2AFY-220ENST00000513268 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
H2AFY-220ENST00000513268 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
H2AFY-220ENST00000513268 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
H2AFY-220ENST00000513268 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
H2AFY-220ENST00000513268 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
H2AFY-220ENST00000513268 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
H2AFY-220ENST00000513268 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
H2AFY-220ENST00000513268 COL16A1Q07092 1604 aaPredicted RBP13.1□□□□□ -0.31
H2AFY-220ENST00000513268 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
H2AFY-220ENST00000513268 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
H2AFY-220ENST00000513268 MED1Q15648 1581 aaPredicted RBP13.08□□□□□ -0.32
H2AFY-220ENST00000513268 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
H2AFY-220ENST00000513268 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
H2AFY-220ENST00000513268 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
H2AFY-220ENST00000513268 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
H2AFY-220ENST00000513268 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
H2AFY-220ENST00000513268 NHSL1Q5SYE7 1610 aa13.07□□□□□ -0.32
H2AFY-220ENST00000513268 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
H2AFY-220ENST00000513268 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
H2AFY-220ENST00000513268 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
H2AFY-220ENST00000513268 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
H2AFY-220ENST00000513268 ADGRB2O60241 1585 aa13.04□□□□□ -0.32
H2AFY-220ENST00000513268 PSME1Q06323 249 aa13.04□□□□□ -0.32
H2AFY-220ENST00000513268 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
H2AFY-220ENST00000513268 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
H2AFY-220ENST00000513268 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
H2AFY-220ENST00000513268 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
H2AFY-220ENST00000513268 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
H2AFY-220ENST00000513268 FOXO3O43524 673 aa13.02□□□□□ -0.33
H2AFY-220ENST00000513268 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
H2AFY-220ENST00000513268 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
H2AFY-220ENST00000513268 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
H2AFY-220ENST00000513268 GPRASP1Q5JY77 1395 aa13.01□□□□□ -0.33
H2AFY-220ENST00000513268 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
H2AFY-220ENST00000513268 KIF1AQ12756 1690 aa13□□□□□ -0.33
H2AFY-220ENST00000513268 TONSLQ96HA7 1378 aa13□□□□□ -0.33
H2AFY-220ENST00000513268 SLC24A1O60721 1099 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms