RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CPLX1O14810 134 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 CABP2Q9NPB3 220 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 DDX19BQ9UMR2 479 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 TROQ12816 1431 aaPredicted RBP5.19□□□□□ -1.58
VCAN-209ENST00000513016 CLUAP1Q96AJ1 413 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 TOPBP1Q92547 1522 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 USP47Q96K76 1375 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 TPM3P06753 285 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 XBP1P17861 261 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 SAFBQ15424 915 aaKnown RBP eCLIP5.19□□□□□ -1.58
VCAN-209ENST00000513016 NFXL1Q6ZNB6 911 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 SLC26A8Q96RN1 970 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 HOOK1Q9UJC3 728 aaKnown RBP5.19□□□□□ -1.58
VCAN-209ENST00000513016 ANKRD30BQ9BXX2 1392 aa5.19□□□□□ -1.58
VCAN-209ENST00000513016 BRMS1Q9HCU9 246 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 STARD3NLO95772 234 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 AIMP1Q12904 312 aaKnown RBP5.18□□□□□ -1.58
VCAN-209ENST00000513016 FGD6Q6ZV73 1430 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 KIAA0586Q9BVV6 1533 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 LAMC3Q9Y6N6 1575 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 GNAI3P08754 354 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 CADPS2Q86UW7 1296 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 TPM1P09493 284 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 SART3Q15020 963 aaKnown RBP5.18□□□□□ -1.58
VCAN-209ENST00000513016 RALYLQ86SE5 291 aaKnown RBP5.18□□□□□ -1.58
VCAN-209ENST00000513016 GGNBP2Q9H3C7 697 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 UBAP1LF5GYI3 381 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 TMEM132EQ6IEE7 984 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 NEUROD6Q96NK8 337 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 CDK19Q9BWU1 502 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 ANKRD20A12PQ8NF67 263 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 TEX14Q8IWB6 1497 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 UBTFL1P0CB47 393 aaPredicted RBP5.18□□□□□ -1.58
VCAN-209ENST00000513016 ERC1Q8IUD2 1116 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 CNNM1Q9NRU3 951 aa5.18□□□□□ -1.58
VCAN-209ENST00000513016 ATAD2Q6PL18 1390 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 AAMPQ13685 434 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 ZNF530Q6P9A1 599 aaPredicted RBP5.17□□□□□ -1.58
VCAN-209ENST00000513016 SAMD1Q6SPF0 538 aaPredicted RBP5.17□□□□□ -1.58
VCAN-209ENST00000513016 NESP48681 1621 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 EFCAB5A4FU69 1503 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 PHF14O94880 888 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 ANKRD45Q5TZF3 282 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 KIF21BO75037 1637 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 REC8O95072 547 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 WASHC4Q2M389 1173 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 NECTIN2Q92692 538 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 FAM177BA6PVY3 158 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 MTHFSP49914 203 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 SYNJ1O43426 1573 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 ZPR1O75312 459 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 NBPF8Q3BBV2 869 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 CCDC158Q5M9N0 1113 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 NBPF14Q5TI25 921 aa5.17□□□□□ -1.58
VCAN-209ENST00000513016 ZNF644Q9H582 1327 aaPredicted RBP5.17□□□□□ -1.58
VCAN-209ENST00000513016 PLIN1O60240 522 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 PLB1Q6P1J6 1458 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 CFAP70Q5T0N1 1121 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 HIP1O00291 1037 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 ZSCAN25Q6NSZ9 544 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.16□□□□□ -1.58
VCAN-209ENST00000513016 MAGI1Q96QZ7 1491 aaPredicted RBP5.16□□□□□ -1.58
VCAN-209ENST00000513016 CREBRFQ8IUR6 639 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 MPHOSPH8Q99549 860 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 DENND4BO75064 1496 aaPredicted RBP5.16□□□□□ -1.58
VCAN-209ENST00000513016 DNMBPQ6XZF7 1577 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 EXOC5O00471 708 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 HMOX1P09601 288 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 MSH6P52701 1360 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 EPRSP07814 1512 aaKnown RBP5.16□□□□□ -1.58
VCAN-209ENST00000513016 APAF1O14727 1248 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 CLASRPQ8N2M8 674 aaKnown RBP5.16□□□□□ -1.58
VCAN-209ENST00000513016 DAPK1P53355 1430 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 C9orf84Q5VXU9 1444 aa5.16□□□□□ -1.58
VCAN-209ENST00000513016 NCOA2Q15596 1464 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 RBM5P52756 815 aaKnown RBP eCLIP5.15□□□□□ -1.58
VCAN-209ENST00000513016 TMEM132AQ24JP5 1023 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 FYB1O15117 783 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 ADAMTS2O95450 1211 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 DZIP1LQ8IYY4 767 aaKnown RBP5.15□□□□□ -1.58
VCAN-209ENST00000513016 CCDC61Q9Y6R9 512 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 NINLQ9Y2I6 1382 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 HSP90AB3PQ58FF7 597 aa5.15□□□□□ -1.58
VCAN-209ENST00000513016 PES1O00541 588 aaKnown RBP5.15□□□□□ -1.59
VCAN-209ENST00000513016 MSNP26038 577 aaKnown RBP5.15□□□□□ -1.59
VCAN-209ENST00000513016 NACAP1Q9BZK3 213 aa5.15□□□□□ -1.59
VCAN-209ENST00000513016 ANO2Q9NQ90 1003 aa5.15□□□□□ -1.59
VCAN-209ENST00000513016 TMOD3Q9NYL9 352 aa5.15□□□□□ -1.59
VCAN-209ENST00000513016 IGHMBP2P38935 993 aaKnown RBP5.15□□□□□ -1.59
VCAN-209ENST00000513016 PHF8Q9UPP1 1060 aa5.15□□□□□ -1.59
VCAN-209ENST00000513016 POLA1P09884 1462 aaPredicted RBP5.15□□□□□ -1.59
VCAN-209ENST00000513016 TTC39AQ5SRH9 613 aa5.15□□□□□ -1.59
VCAN-209ENST00000513016 A0A087WZG4 1122 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 A0A0U1RQG5 324 aaPredicted RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 AMOTQ4VCS5 1084 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 TEX13AQ9BXU3 409 aaPredicted RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 CCDC57Q2TAC2 916 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 PAXIP1Q6ZW49 1069 aaPredicted RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 ZC3H6P61129 1189 aaKnown RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 BCL11BQ9C0K0 894 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms