RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 IFT172Q9UG01 1749 aa7.76□□□□□ -1.17
PROM1-211ENST00000511153 NPHP4O75161 1426 aaPredicted RBP7.76□□□□□ -1.17
PROM1-211ENST00000511153 ECM2O94769 699 aaPredicted RBP7.76□□□□□ -1.17
PROM1-211ENST00000511153 ARHGAP23Q9P227 1491 aa7.75□□□□□ -1.17
PROM1-211ENST00000511153 SLIT1O75093 1534 aa7.75□□□□□ -1.17
PROM1-211ENST00000511153 NBPF1Q3BBV0 1214 aa7.75□□□□□ -1.17
PROM1-211ENST00000511153 DCAF8Q5TAQ9 597 aa7.75□□□□□ -1.17
PROM1-211ENST00000511153 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.75□□□□□ -1.17
PROM1-211ENST00000511153 FARP1Q9Y4F1 1045 aaPredicted RBP7.75□□□□□ -1.17
PROM1-211ENST00000511153 ZNF335Q9H4Z2 1342 aaPredicted RBP7.74□□□□□ -1.17
PROM1-211ENST00000511153 VGFO15240 615 aaPredicted RBP7.74□□□□□ -1.17
PROM1-211ENST00000511153 SAFB2Q14151 953 aaKnown RBP eCLIP7.74□□□□□ -1.17
PROM1-211ENST00000511153 KDM5AP29375 1690 aaKnown RBP7.73□□□□□ -1.17
PROM1-211ENST00000511153 METP08581 1390 aa7.73□□□□□ -1.17
PROM1-211ENST00000511153 RGL2O15211 777 aa7.73□□□□□ -1.17
PROM1-211ENST00000511153 HDGFP51858 240 aaKnown RBP7.73□□□□□ -1.17
PROM1-211ENST00000511153 HIRIP3Q9BW71 556 aaPredicted RBP7.73□□□□□ -1.17
PROM1-211ENST00000511153 NRXN3Q9Y4C0 1643 aa7.73□□□□□ -1.17
PROM1-211ENST00000511153 RPGRIP1LQ68CZ1 1315 aa7.73□□□□□ -1.17
PROM1-211ENST00000511153 PLEKHG1Q9ULL1 1385 aa7.72□□□□□ -1.17
PROM1-211ENST00000511153 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
PROM1-211ENST00000511153 ADAMTS13Q76LX8 1427 aa7.72□□□□□ -1.17
PROM1-211ENST00000511153 ALKQ9UM73 1620 aa7.72□□□□□ -1.17
PROM1-211ENST00000511153 SP7Q8TDD2 431 aaPredicted RBP7.71□□□□□ -1.17
PROM1-211ENST00000511153 PRAG1Q86YV5 1406 aa7.71□□□□□ -1.17
PROM1-211ENST00000511153 PIK3C2GO75747 1445 aa7.71□□□□□ -1.18
PROM1-211ENST00000511153 KCNA6P17658 529 aa7.71□□□□□ -1.18
PROM1-211ENST00000511153 PTPRUQ92729 1446 aa7.71□□□□□ -1.18
PROM1-211ENST00000511153 STRCP1A6NGW2 1772 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 CLSPNQ9HAW4 1339 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 WAPLQ7Z5K2 1190 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 TSPYL2Q9H2G4 693 aaPredicted RBP7.7□□□□□ -1.18
PROM1-211ENST00000511153 AMOTL2Q9Y2J4 779 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 MYOM2P54296 1465 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 ASXL1Q8IXJ9 1541 aa7.7□□□□□ -1.18
PROM1-211ENST00000511153 ROCK2O75116 1388 aaKnown RBP7.69□□□□□ -1.18
PROM1-211ENST00000511153 C14orf37Q86TY3 774 aa7.69□□□□□ -1.18
PROM1-211ENST00000511153 C14orf93Q9H972 538 aaKnown RBP7.69□□□□□ -1.18
PROM1-211ENST00000511153 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
PROM1-211ENST00000511153 SETBP1Q9Y6X0 1596 aa7.69□□□□□ -1.18
PROM1-211ENST00000511153 PLEKHH1Q9ULM0 1364 aa7.69□□□□□ -1.18
PROM1-211ENST00000511153 MED14O60244 1454 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
PROM1-211ENST00000511153 CARD11Q9BXL7 1154 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 TBX22Q9Y458 520 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 TRPM1Q7Z4N2 1603 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 NRXN1Q9ULB1 1477 aa7.68□□□□□ -1.18
PROM1-211ENST00000511153 PYGBP11216 843 aa7.67□□□□□ -1.18
PROM1-211ENST00000511153 GSE1Q14687 1217 aa7.67□□□□□ -1.18
PROM1-211ENST00000511153 RNF25Q96BH1 459 aaPredicted RBP7.67□□□□□ -1.18
PROM1-211ENST00000511153 FAM212AQ96EL1 285 aa7.67□□□□□ -1.18
PROM1-211ENST00000511153 PRAM1Q96QH2 718 aa7.67□□□□□ -1.18
PROM1-211ENST00000511153 POGKQ9P215 609 aa7.67□□□□□ -1.18
PROM1-211ENST00000511153 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
PROM1-211ENST00000511153 ROBO2Q9HCK4 1378 aa7.66□□□□□ -1.18
PROM1-211ENST00000511153 YTHDC2Q9H6S0 1430 aaKnown RBP7.66□□□□□ -1.18
PROM1-211ENST00000511153 POLR3GLQ9BT43 218 aa7.66□□□□□ -1.18
PROM1-211ENST00000511153 CHD2O14647 1828 aaKnown RBP7.66□□□□□ -1.18
PROM1-211ENST00000511153 ADGRB1O14514 1584 aa7.65□□□□□ -1.19
PROM1-211ENST00000511153 RALGAPBQ86X10 1494 aa7.64□□□□□ -1.19
PROM1-211ENST00000511153 DIP2AQ14689 1571 aa7.64□□□□□ -1.19
PROM1-211ENST00000511153 LAMC1P11047 1609 aa7.64□□□□□ -1.19
PROM1-211ENST00000511153 LRPPRCP42704 1394 aaKnown RBP7.63□□□□□ -1.19
PROM1-211ENST00000511153 TMEM94Q12767 1356 aa7.63□□□□□ -1.19
PROM1-211ENST00000511153 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
PROM1-211ENST00000511153 XIRP1Q702N8 1843 aaKnown RBP7.63□□□□□ -1.19
PROM1-211ENST00000511153 XRN1Q8IZH2 1706 aaKnown RBP7.63□□□□□ -1.19
PROM1-211ENST00000511153 ARHGEF28Q8N1W1 1705 aaKnown RBP7.63□□□□□ -1.19
PROM1-211ENST00000511153 ST20-MTHFSA0A0A6YYL1 179 aa7.63□□□□□ -1.19
PROM1-211ENST00000511153 PIP4K2BP78356 416 aa7.63□□□□□ -1.19
PROM1-211ENST00000511153 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
PROM1-211ENST00000511153 KIAA1210Q9ULL0 1709 aa7.62□□□□□ -1.19
PROM1-211ENST00000511153 LRRC7Q96NW7 1537 aa7.62□□□□□ -1.19
PROM1-211ENST00000511153 USP47Q96K76 1375 aa7.62□□□□□ -1.19
PROM1-211ENST00000511153 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.62□□□□□ -1.19
PROM1-211ENST00000511153 LTBP4Q8N2S1 1624 aa7.62□□□□□ -1.19
PROM1-211ENST00000511153 CENPJQ9HC77 1338 aaPredicted RBP7.61□□□□□ -1.19
PROM1-211ENST00000511153 QRICH2Q9H0J4 1663 aa7.61□□□□□ -1.19
PROM1-211ENST00000511153 NWD1Q149M9 1564 aa7.61□□□□□ -1.19
PROM1-211ENST00000511153 NALCNQ8IZF0 1738 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 CERKQ8TCT0 537 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 STAC3Q96MF2 364 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 CABP2Q9NPB3 220 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 KNDC1Q76NI1 1749 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 ABCC11Q96J66 1382 aa7.6□□□□□ -1.19
PROM1-211ENST00000511153 CPS1P31327 1500 aa7.59□□□□□ -1.19
PROM1-211ENST00000511153 UBAP1LF5GYI3 381 aa7.59□□□□□ -1.19
PROM1-211ENST00000511153 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
PROM1-211ENST00000511153 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
PROM1-211ENST00000511153 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
PROM1-211ENST00000511153 DDX17Q92841 729 aaKnown RBP7.59□□□□□ -1.19
PROM1-211ENST00000511153 CCDC61Q9Y6R9 512 aa7.59□□□□□ -1.19
PROM1-211ENST00000511153 PIK3R4Q99570 1358 aa7.59□□□□□ -1.19
PROM1-211ENST00000511153 RGPD8O14715 1765 aaPredicted RBP7.59□□□□□ -1.19
PROM1-211ENST00000511153 ATF3P18847 181 aa7.59□□□□□ -1.2
PROM1-211ENST00000511153 SRPK2P78362 688 aaKnown RBP7.59□□□□□ -1.2
PROM1-211ENST00000511153 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.2
PROM1-211ENST00000511153 GPRASP1Q5JY77 1395 aa7.58□□□□□ -1.2
PROM1-211ENST00000511153 NKTRP30414 1462 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms