RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	GOLGA8CP	A6NN73	597 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	HR	O43593	1189 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	USP17L8	P0C7I0	530 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	ATP6V1A	P38606	617 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	MTMR2	Q13614	643 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	KMT5B	Q4FZB7	885 aa		6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	ZNF777	Q9ULD5	760 aa	Predicted RBP	6	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	PUS10	Q3MIT2	529 aa	Known RBP	5.99	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	ANKK1	Q8NFD2	765 aa		5.99	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	SYMPK	Q92797	1274 aa	Known RBP	5.99	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	GDPD2	Q9HCC8	539 aa		5.99	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	ABL2	P42684	1182 aa		5.98	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	CTDSPL2	Q05D32	466 aa		5.98	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5.98	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	NECTIN2	Q92692	538 aa		5.98	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	CFAP99	D6REC4	459 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	ACTN4	O43707	911 aa	Known RBP	5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	BCAM	P50895	628 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	PPP4C	P60510	307 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	HELB	Q8NG08	1087 aa	Predicted RBP	5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	WNT2B	Q93097	391 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	PRM3	Q9NNZ6	103 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	TBC1D2B	Q9UPU7	963 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	HPS5	Q9UPZ3	1129 aa		5.97	□□□□□ -1.45
CALCOCO2-216	ENST00000509784	SOWAHB	A6NEL2	793 aa		5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	MORN1	Q5T089	497 aa		5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	PRR7	Q8TB68	274 aa		5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	LRRN4	Q8WUT4	740 aa		5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	HMX1	Q9NP08	348 aa	Predicted RBP	5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	SLC27A5	Q9Y2P5	690 aa		5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	ZNF330	Q9Y3S2	320 aa	Predicted RBP	5.96	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	APLP1	P51693	650 aa		5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	WWC1	Q8IX03	1113 aa		5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	CCDC82	Q8N4S0	544 aa		5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	GJD4	Q96KN9	370 aa	Predicted RBP	5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	PRR14	Q9BWN1	585 aa		5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	TSR3	Q9UJK0	312 aa	Known RBP	5.95	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	SOCS7	O14512	581 aa		5.94	□□□□□ -1.46
CALCOCO2-216	ENST00000509784		Q3C1V9	767 aa		5.94	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	NDUFB9	Q9Y6M9	179 aa		5.94	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	RNF19B	Q6ZMZ0	732 aa		5.93	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	RETREG3	Q86VR2	466 aa		5.93	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	PER1	O15534	1290 aa	Predicted RBP	5.92	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	BLOC1S3	Q6QNY0	202 aa		5.92	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	TRIM34	Q9BYJ4	488 aa		5.92	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	PCDHB3	Q9Y5E6	796 aa		5.92	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	POM121C	A8CG34	1229 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	SCUBE3	Q8IX30	993 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	EPS8L1	Q8TE68	723 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	CCDC97	Q96F63	343 aa	Predicted RBP	5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	KRTAP3-3	Q9BYR6	98 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	KRTAP3-2	Q9BYR7	98 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	WBP1L	Q9NX94	342 aa		5.91	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	NR1I2	O75469	434 aa		5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	IRF5	Q13568	498 aa		5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	NR6A1	Q15406	480 aa		5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	BRICD5	Q6PL45	260 aa		5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	USB1	Q9BQ65	265 aa	Known RBP	5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	SERPINA10	Q9UK55	444 aa		5.9	□□□□□ -1.46
CALCOCO2-216	ENST00000509784	FMNL1	O95466	1100 aa	Predicted RBP	5.89	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	KCTD12	Q96CX2	325 aa	Known RBP	5.89	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	CALR3	Q96L12	384 aa	Known RBP	5.89	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	GPR37L1	O60883	481 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	COPS2	P61201	443 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	VAC14	Q08AM6	782 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	DESI1	Q6ICB0	168 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	LYPD8	Q6UX82	237 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	THSD4	Q6ZMP0	1018 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	GLMN	Q92990	594 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	THAP11	Q96EK4	314 aa		5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	SALL2	Q9Y467	1007 aa	Predicted RBP	5.88	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	WASHC4	Q2M389	1173 aa		5.87	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	PCDH10	Q9P2E7	1040 aa		5.87	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	HDGFL1	Q5TGJ6	251 aa		5.86	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	SPSB2	Q99619	263 aa		5.86	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	JUND	P17535	347 aa		5.85	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	PTPN5	P54829	565 aa		5.85	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	CTH	P32929	405 aa		5.84	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	FAM160A2	Q8N612	972 aa	Predicted RBP	5.84	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	PNMA1	Q8ND90	353 aa		5.84	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	ADAMTS19	Q8TE59	1207 aa		5.84	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	MAP10	Q9P2G4	905 aa		5.84	□□□□□ -1.47
CALCOCO2-216	ENST00000509784	POTEM	A6NI47	508 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	TLL1	O43897	1013 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	PTPRN	Q16849	979 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	MSS51	Q4VC12	460 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	CDAN1	Q8IWY9	1227 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	PRDM9	Q9NQV7	894 aa		5.83	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	ZPR1	O75312	459 aa		5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	F12	P00748	615 aa	Predicted RBP	5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	POTEG	Q6S5H5	508 aa		5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	NYAP1	Q6ZVC0	841 aa		5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	MTR	Q99707	1265 aa		5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	FKBPL	Q9UIM3	349 aa		5.82	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	DXO	O77932	396 aa	Known RBP	5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	CCNYL3	P0C7X3	344 aa		5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	MMP16	P51512	607 aa		5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	SEMA3F	Q13275	785 aa		5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	ZNF516	Q92618	1163 aa		5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	NUDT12	Q9BQG2	462 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms